RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ERC1Q8IUD2 1116 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 KRTAP1-3Q8IUG1 177 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 LRRC47Q8N1G4 583 aaKnown RBP5.46□□□□□ -1.54
SNHG1-214ENST00000540865 STAG1Q8WVM7 1258 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 DHX38Q92620 1227 aaKnown RBP5.46□□□□□ -1.54
SNHG1-214ENST00000540865 BHMTQ93088 406 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 GSX2Q9BZM3 304 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 MKNK2Q9HBH9 465 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 ARPP21Q9UBL0 812 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-214ENST00000540865 ADD3Q9UEY8 706 aaKnown RBP5.46□□□□□ -1.54
SNHG1-214ENST00000540865 KLF15Q9UIH9 416 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 PRR12Q9ULL5 1215 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 POLIQ9UNA4 740 aa5.46□□□□□ -1.54
SNHG1-214ENST00000540865 TPRP12270 2363 aaKnown RBP5.46□□□□□ -1.54
SNHG1-214ENST00000540865 ZNFX1Q9P2E3 1918 aaKnown RBP5.46□□□□□ -1.54
SNHG1-214ENST00000540865 ZNF292O60281 2723 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 PRR23AA6NEV1 266 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 LOC730098B7Z3J9 87 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 ANP32CO43423 234 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 PLA2G6O60733 806 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 XYLBO75191 536 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 EYA4O95677 639 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 TTLL1O95922 423 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 PDGFAP04085 211 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 RB1P06400 928 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 TRIM27P14373 513 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 EPB42P16452 691 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 AVPR2P30518 371 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 ALDH5A1P51649 535 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-214ENST00000540865 SIGLEC14Q08ET2 396 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 HYAL1Q12794 435 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 CCINQ13939 588 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 CBX2Q14781 532 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-214ENST00000540865 PPP2R5BQ15173 497 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 MUM1L1Q5H9M0 696 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 GDF6Q6KF10 455 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-214ENST00000540865 GIMAP6Q6P9H5 292 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.45□□□□□ -1.54
SNHG1-214ENST00000540865 ASCL5Q7RTU5 278 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 SYT9Q86SS6 491 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 AACSQ86V21 672 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 FBXO11Q86XK2 927 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 TMEM192Q8IY95 271 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 SCFD2Q8WU76 684 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 PPP1R13LQ8WUF5 828 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 PIK3R5Q8WYR1 880 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 ASIC4Q96FT7 647 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 FSD1Q9BTV5 496 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 LMAN2LQ9H0V9 348 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 ZNF287Q9HBT7 754 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 MTMR4Q9NYA4 1195 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 ZFATQ9P243 1243 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 CD207Q9UJ71 328 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 SLC4A4Q9Y6R1 1079 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 EMSYQ7Z589 1322 aa5.45□□□□□ -1.54
SNHG1-214ENST00000540865 C5orf67F2Z3F1 127 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 H0Y858 1186 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 TXNP10599 105 aaKnown RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 NFKB1P19838 968 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 EDNRBP24530 442 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 NBL1P41271 181 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 SLC1A4P43007 532 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 VCPP55072 806 aaKnown RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 CHMP4BP1P59074 171 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 SNRPNP63162 240 aaKnown RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 DLX2Q07687 328 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 IKQ13123 557 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 ADAM15Q13444 863 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 BAATQ14032 418 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 MBTPS1Q14703 1052 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 UBE3CQ15386 1083 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 CLUL1Q15846 466 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 TRIM71Q2Q1W2 868 aaKnown RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 C8orf34Q49A92 452 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 ZNF468Q5VIY5 522 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 ALKBH2Q6NS38 261 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 NSMFQ6X4W1 530 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 C1orf229Q6ZS94 237 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 MYOCDQ8IZQ8 938 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 ZNF444Q8N0Y2 327 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 KAT2BQ92831 832 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 TOP1MTQ969P6 601 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 CEP95Q96GE4 821 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 PNMA5Q96PV4 448 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 YME1L1Q96TA2 773 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 DNAJC2Q99543 621 aaKnown RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 MPHOSPH6Q99547 160 aaKnown RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 OXCT2Q9BYC2 517 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 GZF1Q9H116 711 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 IGFLR1Q9H665 355 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 TLR9Q9NR96 1032 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 GTF2IRD1Q9UHL9 959 aa5.44□□□□□ -1.54
SNHG1-214ENST00000540865 EP300Q09472 2414 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-214ENST00000540865 ACACBO00763 2458 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 B4DLN1 442 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 TBX10O75333 385 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 ICAM1P05362 532 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 RARAP10276 462 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 CASTP20810 708 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms