RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 PNMA5Q96PV4 448 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 CCDC39Q9UFE4 941 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 IGKV6-21A0A0C4DH24 114 aa17.27■□□□□ 0.36
DDB1-218ENST00000540784 ARHGEF35A5YM69 484 aa17.27■□□□□ 0.36
DDB1-218ENST00000540784 E9PMD0 336 aa17.27■□□□□ 0.36
DDB1-218ENST00000540784 EYA4O95677 639 aa17.27■□□□□ 0.36
DDB1-218ENST00000540784 MDM2Q00987 491 aaPredicted RBP17.27■□□□□ 0.36
DDB1-218ENST00000540784 LRRC8DQ7L1W4 858 aa17.27■□□□□ 0.36
DDB1-218ENST00000540784 LRRC71Q8N4P6 559 aa17.27■□□□□ 0.36
DDB1-218ENST00000540784 SYMPKQ92797 1274 aaKnown RBP17.27■□□□□ 0.36
DDB1-218ENST00000540784 BHMT2Q9H2M3 363 aa17.27■□□□□ 0.36
DDB1-218ENST00000540784 DHX33Q9H6R0 707 aaKnown RBP17.27■□□□□ 0.36
DDB1-218ENST00000540784 ALPK3Q96L96 1907 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 M0QZ92 97 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 DGAT1O75907 488 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 PARNO95453 639 aaKnown RBP17.26■□□□□ 0.35
DDB1-218ENST00000540784 RFC2P35250 354 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 CLCN3P51790 818 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 CDC42EP1Q00587 391 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 FPGSQ05932 587 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 KARSQ15046 597 aaKnown RBP17.26■□□□□ 0.35
DDB1-218ENST00000540784 FAM26DQ5JW98 314 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 AXDND1Q5T1B0 1012 aaPredicted RBP17.26■□□□□ 0.35
DDB1-218ENST00000540784 PADI6Q6TGC4 694 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 RPUSD2Q8IZ73 545 aaKnown RBP17.26■□□□□ 0.35
DDB1-218ENST00000540784 SCLYQ96I15 445 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 MAP7D2Q96T17 732 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 PANK2Q9BZ23 570 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 WNT8AQ9H1J5 351 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 PCDH10Q9P2E7 1040 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 SUCLA2Q9P2R7 463 aaPredicted RBP17.26■□□□□ 0.35
DDB1-218ENST00000540784 AKT3Q9Y243 479 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 KAT6AQ92794 2004 aa17.26■□□□□ 0.35
DDB1-218ENST00000540784 GAS2O43903 313 aaKnown RBP17.25■□□□□ 0.35
DDB1-218ENST00000540784 CHRNA1P02708 482 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 CTSHP09668 335 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 CSF2RAP15509 400 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 MAGEA10P43363 369 aaPredicted RBP17.25■□□□□ 0.35
DDB1-218ENST00000540784 MRPS6P82932 125 aaKnown RBP17.25■□□□□ 0.35
DDB1-218ENST00000540784 TMEM62Q0P6H9 643 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 PPIGQ13427 754 aaKnown RBP eCLIP17.25■□□□□ 0.354e-6■■■■□ 19.6
DDB1-218ENST00000540784 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
DDB1-218ENST00000540784 TMEM119Q4V9L6 283 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 RRAGBQ5VZM2 374 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 KCNK18Q7Z418 384 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 ZNF710Q8N1W2 664 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 LINC01465Q8N7H1 131 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 TCP11Q8WWU5 503 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 MTRQ99707 1265 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 CELF4Q9BZC1 486 aaKnown RBP17.25■□□□□ 0.35
DDB1-218ENST00000540784 ATP6V0A4Q9HBG4 840 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 FAM13BQ9NYF5 915 aa17.25■□□□□ 0.35
DDB1-218ENST00000540784 VTNP04004 478 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 SSBP05455 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
DDB1-218ENST00000540784 PLA2G4BP0C869 781 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 CYP11B2P19099 503 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 PLCG1P19174 1290 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 EMC2Q15006 297 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 ADALQ6DHV7 355 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 TRAF7Q6Q0C0 670 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 SHC4Q6S5L8 630 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 CCDC73Q6ZRK6 1079 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 SYT2Q8N9I0 419 aaPredicted RBP17.24■□□□□ 0.35
DDB1-218ENST00000540784 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 GDPD2Q9HCC8 539 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
DDB1-218ENST00000540784 TRPV2Q9Y5S1 764 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 CDY2AQ9Y6F7 541 aa17.24■□□□□ 0.35
DDB1-218ENST00000540784 TRIP12Q14669 1992 aaPredicted RBP17.24■□□□□ 0.35
DDB1-218ENST00000540784 ASAP2O43150 1006 aa17.23■□□□□ 0.35
DDB1-218ENST00000540784 USO1O60763 962 aaKnown RBP17.23■□□□□ 0.35
DDB1-218ENST00000540784 NLRP11P59045 1033 aaKnown RBP17.23■□□□□ 0.35
DDB1-218ENST00000540784 MGAT3Q09327 533 aa17.23■□□□□ 0.35
DDB1-218ENST00000540784 DRP2Q13474 957 aa17.23■□□□□ 0.35
DDB1-218ENST00000540784 MAEAQ7L5Y9 396 aa17.23■□□□□ 0.35
DDB1-218ENST00000540784 DEFB128Q7Z7B8 93 aa17.23■□□□□ 0.35
DDB1-218ENST00000540784 MCPH1Q8NEM0 835 aa17.23■□□□□ 0.35
DDB1-218ENST00000540784 PRPF31Q8WWY3 499 aaKnown RBP17.23■□□□□ 0.35
DDB1-218ENST00000540784 PSPC1Q8WXF1 523 aaKnown RBP17.23■□□□□ 0.35
DDB1-218ENST00000540784 IL23AQ9NPF7 189 aa17.23■□□□□ 0.35
DDB1-218ENST00000540784 GINS2Q9Y248 185 aa17.23■□□□□ 0.35
DDB1-218ENST00000540784 WDR81Q562E7 1941 aa17.22■□□□□ 0.35
DDB1-218ENST00000540784 CMA1P23946 247 aa17.22■□□□□ 0.35
DDB1-218ENST00000540784 CRYBB1P53674 252 aaPredicted RBP17.22■□□□□ 0.35
DDB1-218ENST00000540784 DHX8Q14562 1220 aaKnown RBP17.22■□□□□ 0.35
DDB1-218ENST00000540784 KIZQ2M2Z5 673 aa17.22■□□□□ 0.35
DDB1-218ENST00000540784 RESP18Q5W5W9 173 aa17.22■□□□□ 0.35
DDB1-218ENST00000540784 RHPN2Q8IUC4 686 aa17.22■□□□□ 0.35
DDB1-218ENST00000540784 RAD54LQ92698 747 aa17.22■□□□□ 0.35
DDB1-218ENST00000540784 GDF15Q99988 308 aa17.22■□□□□ 0.35
DDB1-218ENST00000540784 UBE2OQ9C0C9 1292 aaKnown RBP17.22■□□□□ 0.35
DDB1-218ENST00000540784 CDHR5Q9HBB8 845 aa17.22■□□□□ 0.35
DDB1-218ENST00000540784 XPNPEP1Q9NQW7 623 aa17.22■□□□□ 0.35
DDB1-218ENST00000540784 GOLGA6L4A6NEF3 574 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 NBNO60934 754 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 GPR32O75388 356 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 FGBP02675 491 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 PFKMP08237 780 aa17.21■□□□□ 0.35
DDB1-218ENST00000540784 SRGAP2CP0DJJ0 459 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms