RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 BHMT2Q9H2M3 363 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 LRRC4BQ9NT99 713 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 RGL1Q9NZL6 768 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 CTNNAL1Q9UBT7 734 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 PNMA2Q9UL42 364 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DAGLAQ9Y4D2 1042 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DCAF8L1A6NGE4 600 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 RGS16O15492 202 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 AP5Z1O43299 807 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 CTNND1O60716 968 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 STK10O94804 968 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 HSPA8P11142 646 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 STX2P32856 288 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 UBA7P41226 1012 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 STAT6P42226 847 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 GJA8P48165 433 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 MRPL12P52815 198 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 PTGDRQ13258 359 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 FAM47AQ5JRC9 791 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 C10orf76Q5T2E6 689 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 MAPKAPK5Q8IW41 473 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 NRBF2Q96F24 287 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 RABL2AQ9UBK7 228 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 A0A1B0GW55 424 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 IPO5O00410 1097 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DUX4L2P0CJ85 424 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DUX4L3P0CJ86 424 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DUX4L4P0CJ87 422 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DUX4L5P0CJ88 424 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DUX4L6P0CJ89 424 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DUX4L7P0CJ90 424 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 SERPINB4P48594 390 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 PDE6CP51160 858 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ADCY7P51828 1080 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 RHBDL3P58872 404 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DDR1Q08345 913 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DPYDQ12882 1025 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 TNIP1Q15025 636 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 TEDDM1Q5T9Z0 273 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 THEMIS2Q5TEJ8 643 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ZNF658Q5TYW1 1059 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 MOXD1Q6UVY6 613 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 PIK3AP1Q6ZUJ8 805 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 NEK8Q86SG6 692 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 NLRP14Q86W24 1093 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 TERB1Q8NA31 727 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ITFG2Q969R8 447 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 PAGE5Q96GU1 130 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 PANX2Q96RD6 677 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 KIFC3Q9BVG8 833 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 FAM192AQ9GZU8 254 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 RIOX1Q9H6W3 641 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 POLD4Q9HCU8 107 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 DUX4Q9UBX2 424 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 SERPINB13Q9UIV8 391 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 STX8Q9UNK0 236 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 H0YIN7 160 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 GAS8O95995 478 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 OR52Z1P0C646 297 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 PHBP35232 272 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 C2orf54Q08AI8 447 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ANKRD20A3Q5VUR7 823 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 YTHDF3Q7Z739 585 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 REXO1Q8N1G1 1221 aaKnown RBP6.53□□□□□ -1.36
PTPRD-214ENST00000540109 ATP6V0A1Q93050 837 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 SIKE1Q9BRV8 207 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 FANCLQ9NW38 375 aa6.53□□□□□ -1.36
PTPRD-214ENST00000540109 CYP2D7A0A087X1C5 515 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 ENTPD3O75355 529 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 TADA3O75528 432 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 SNHG28P0DPA3 235 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 ZNF18P17022 549 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 EEF1GP26641 437 aaKnown RBP6.52□□□□□ -1.37
PTPRD-214ENST00000540109 SNX1Q13596 522 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 KRR1Q13601 381 aaKnown RBP6.52□□□□□ -1.37
PTPRD-214ENST00000540109 SCYL3Q8IZE3 742 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 TBC1D5Q92609 795 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 CLIC6Q96NY7 704 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 ZCWPW1Q9H0M4 648 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 NYAP2Q9P242 653 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 ABCB11O95342 1321 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 KDM3AQ9Y4C1 1321 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 IGKV6D-41A0A0C4DH26 115 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 H7C1D1 291 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 DCTN3O75935 186 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 PECAM1P16284 738 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-214ENST00000540109 CCNHP51946 323 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-214ENST00000540109 HEATR3Q7Z4Q2 680 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 TXNRD3Q86VQ6 643 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 TRMT44Q8IYL2 757 aaKnown RBP6.52□□□□□ -1.37
PTPRD-214ENST00000540109 MAGEC3Q8TD91 643 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 OXER1Q8TDS5 423 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 DHTKD1Q96HY7 919 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-214ENST00000540109 ZDHHC15Q96MV8 337 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 IDI2Q9BXS1 227 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 ATP6V0A4Q9HBG4 840 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 TMOD2Q9NZR1 351 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 DLGAP2Q9P1A6 1054 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 MYH1P12882 1939 aa6.52□□□□□ -1.37
PTPRD-214ENST00000540109 CYP2D6P10635 497 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms