RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 SP4Q02446 784 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 HP1BP3Q5SSJ5 553 aaPredicted RBP14.02□□□□□ -0.17
MSH6-210ENST00000540021 TPCN2Q8NHX9 752 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 ANO3Q9BYT9 981 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 TPX2Q9ULW0 747 aaKnown RBP14.02□□□□□ -0.17
MSH6-210ENST00000540021 L3MBTL1Q9Y468 752 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 PNMA6FA0A0J9YX94 578 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 TCP11X1B4DZS4 312 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 DIAPH2O60879 1101 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 FSBPO95073 299 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 TTLL1O95922 423 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 HSPA9P38646 679 aaKnown RBP14.01□□□□□ -0.17
MSH6-210ENST00000540021 LONRF1Q17RB8 773 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 FAM98CQ17RN3 349 aaKnown RBP14.01□□□□□ -0.17
MSH6-210ENST00000540021 LRIG3Q6UXM1 1119 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 FBXO33Q7Z6M2 555 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 ZNF622Q969S3 477 aaKnown RBP eCLIP14.01□□□□□ -0.177e-14■■■□□ 18.5
MSH6-210ENST00000540021 BICD1Q96G01 975 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 MMTAG2Q9BU76 263 aaKnown RBP14.01□□□□□ -0.17
MSH6-210ENST00000540021 SLITRK6Q9H5Y7 841 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 RGL1Q9NZL6 768 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 NMT1P30419 496 aaKnown RBP14.01□□□□□ -0.17
MSH6-210ENST00000540021 SLC30A10Q6XR72 485 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 NEDD1Q8NHV4 660 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 FBXO25Q8TCJ0 367 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 SPDL1Q96EA4 605 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 FGFBP2Q9BYJ0 223 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 DHX36Q9H2U1 1008 aaKnown RBP14.01□□□□□ -0.17
MSH6-210ENST00000540021 NOD2Q9HC29 1040 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 PARP2Q9UGN5 583 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 PASKQ96RG2 1323 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 TLR2O60603 784 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 CPP00450 1065 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 ATP5DP30049 168 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 SRRM1Q8IYB3 904 aaKnown RBP14.01□□□□□ -0.17
MSH6-210ENST00000540021 FUKQ8N0W3 1084 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 EPS8L3Q8TE67 593 aaKnown RBP14.01□□□□□ -0.17
MSH6-210ENST00000540021 LRRC15Q8TF66 581 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 FGFR1OP2Q9NVK5 253 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 LMO7Q8WWI1 1683 aa14.01□□□□□ -0.17
MSH6-210ENST00000540021 CCT8L1PA6NM43 557 aa14□□□□□ -0.17
MSH6-210ENST00000540021 RSPH10B2B2RC85 870 aa14□□□□□ -0.17
MSH6-210ENST00000540021 ATMINO43313 823 aaPredicted RBP14□□□□□ -0.17
MSH6-210ENST00000540021 RSPH10BP0C881 870 aa14□□□□□ -0.17
MSH6-210ENST00000540021 DOK7Q18PE1 504 aa14□□□□□ -0.17
MSH6-210ENST00000540021 ANKRD20A8PQ5CZ79 823 aa14□□□□□ -0.17
MSH6-210ENST00000540021 C6orf118Q5T5N4 469 aa14□□□□□ -0.17
MSH6-210ENST00000540021 SLFN12Q8IYM2 578 aa14□□□□□ -0.17
MSH6-210ENST00000540021 PURBQ96QR8 312 aaKnown RBP14□□□□□ -0.17
MSH6-210ENST00000540021 NAP1L4Q99733 375 aaKnown RBP14□□□□□ -0.17
MSH6-210ENST00000540021 IFNB1P01574 187 aa14□□□□□ -0.17
MSH6-210ENST00000540021 KIAA1755Q5JYT7 1200 aa14□□□□□ -0.17
MSH6-210ENST00000540021 SLFN13Q68D06 897 aa14□□□□□ -0.17
MSH6-210ENST00000540021 INTS5Q6P9B9 1019 aaKnown RBP14□□□□□ -0.17
MSH6-210ENST00000540021 CCDC137Q6PK04 289 aaKnown RBP14□□□□□ -0.17
MSH6-210ENST00000540021 LRRC55Q6ZSA7 311 aa14□□□□□ -0.17
MSH6-210ENST00000540021 ZNF653Q96CK0 615 aa14□□□□□ -0.17
MSH6-210ENST00000540021 REEP2Q9BRK0 252 aa14□□□□□ -0.17
MSH6-210ENST00000540021 ECT2Q9H8V3 914 aa14□□□□□ -0.17
MSH6-210ENST00000540021 SERPINB13Q9UIV8 391 aa14□□□□□ -0.17
MSH6-210ENST00000540021 KIF13AQ9H1H9 1805 aa14□□□□□ -0.17
MSH6-210ENST00000540021 K7ENM7 598 aa14□□□□□ -0.17
MSH6-210ENST00000540021 PJA2O43164 708 aa14□□□□□ -0.17
MSH6-210ENST00000540021 SARNPP82979 210 aaKnown RBP14□□□□□ -0.17
MSH6-210ENST00000540021 PDIA5Q14554 519 aa14□□□□□ -0.17
MSH6-210ENST00000540021 TMED2Q15363 201 aa14□□□□□ -0.17
MSH6-210ENST00000540021 ZC2HC1CQ53FD0 456 aaPredicted RBP14□□□□□ -0.17
MSH6-210ENST00000540021 SGO2Q562F6 1265 aa14□□□□□ -0.17
MSH6-210ENST00000540021 NSMCE1Q8WV22 266 aa14□□□□□ -0.17
MSH6-210ENST00000540021 SCFD1Q8WVM8 642 aa14□□□□□ -0.17
MSH6-210ENST00000540021 C1orf54Q8WWF1 131 aa14□□□□□ -0.17
MSH6-210ENST00000540021 SH2D3AQ9BRG2 576 aa14□□□□□ -0.17
MSH6-210ENST00000540021 YIPF3Q9GZM5 350 aa14□□□□□ -0.17
MSH6-210ENST00000540021 VPS37BQ9H9H4 285 aa14□□□□□ -0.17
MSH6-210ENST00000540021 CCNL1Q9UK58 526 aaPredicted RBP14□□□□□ -0.17
MSH6-210ENST00000540021 GAS7O60861 476 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 ALDH3A1P30838 453 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 PDE6CP51160 858 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 SEMA3FQ13275 785 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 SEPT2Q15019 361 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 TAF11Q15544 211 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 PPP2R5EQ16537 467 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 KAZNQ674X7 775 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 FTLP02792 175 aaPredicted RBP13.99□□□□□ -0.17
MSH6-210ENST00000540021 GCFC2P16383 781 aaKnown RBP13.99□□□□□ -0.17
MSH6-210ENST00000540021 IFI35P80217 286 aaPredicted RBP13.99□□□□□ -0.17
MSH6-210ENST00000540021 ADCY2Q08462 1091 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 BYSLQ13895 437 aaKnown RBP13.99□□□□□ -0.17
MSH6-210ENST00000540021 TNIP1Q15025 636 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 ZNF662Q6ZS27 426 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 JAMLQ86YT9 394 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 C18orf8Q96DM3 657 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 INPP4AQ96PE3 977 aaPredicted RBP13.99□□□□□ -0.17
MSH6-210ENST00000540021 HEMGNQ9BXL5 484 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 NEUROG2Q9H2A3 272 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 WDR91A4D1P6 747 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 GOLGA8IPA6NC78 632 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 GOLGA8JA6NMD2 632 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 ECEL1O95672 775 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 GAS8O95995 478 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms