RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZNF236Q9UL36 1845 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 LGALS16A8MUM7 142 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 BACH1O14867 736 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 TEX33O43247 280 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 STBD1O95210 358 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 GCNT3O95395 438 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 SFPQP23246 707 aaKnown RBP eCLIP18.61■□□□□ 0.57
COPS3-212ENST00000539941 GRB14Q14449 540 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 SYCP1Q15431 976 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 ODR4Q5SWX8 454 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 GPR142Q7Z601 462 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 NELFCDQ8IXH7 590 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 DAW1Q8N136 415 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 FIZ1Q96SL8 496 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 TUBGCP2Q9BSJ2 902 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 VPS16Q9H269 839 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 ZNF302Q9NR11 478 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 TSKSQ9UJT2 592 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 PCDHB13Q9Y5F0 798 aa18.61■□□□□ 0.57
COPS3-212ENST00000539941 SFI1A8K8P3 1242 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 NRDCO43847 1150 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 CALUO43852 315 aaPredicted RBP18.6■□□□□ 0.57
COPS3-212ENST00000539941 USO1O60763 962 aaKnown RBP18.6■□□□□ 0.57
COPS3-212ENST00000539941 GGPS1O95749 300 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 MYBP10242 640 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 MTIF2P46199 727 aaKnown RBP18.6■□□□□ 0.57
COPS3-212ENST00000539941 PRKCEQ02156 737 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 SP4Q02446 784 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 SLC20A2Q08357 652 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 ARMCX2Q7L311 632 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 ZNF720Q7Z2F6 126 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 PLEKHH3Q7Z736 793 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 ZNF710Q8N1W2 664 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 VTA1Q9NP79 307 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 TYW1Q9NV66 732 aaKnown RBP18.6■□□□□ 0.57
COPS3-212ENST00000539941 ARID2Q68CP9 1835 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 A0A1W2PQC6 194 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 IGF2BP3O00425 579 aaKnown RBP eCLIP18.6■□□□□ 0.57
COPS3-212ENST00000539941 PLS3P13797 630 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 DNM2P50570 870 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 TTLL4Q14679 1199 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 CELF3Q5SZQ8 465 aaKnown RBP18.6■□□□□ 0.57
COPS3-212ENST00000539941 FAM160B1Q5W0V3 765 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 CCDC62Q6P9F0 684 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 EEPD1Q7L9B9 569 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 CREBRFQ8IUR6 639 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 SCFD2Q8WU76 684 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 SEPT1Q8WYJ6 367 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 MLXIPQ9HAP2 919 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 C17orf75Q9HAS0 396 aa18.6■□□□□ 0.57
COPS3-212ENST00000539941 MCM3APO60318 1980 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 GSTTP1A0A1W2PQM5 241 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 CCDC66A2RUB6 948 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 SLC15A5A6NIM6 579 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 CA12O43570 354 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 DGAT1O75907 488 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 PRPF6O94906 941 aaKnown RBP18.59■□□□□ 0.57
COPS3-212ENST00000539941 HOXD13P35453 343 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 MARSP56192 900 aaKnown RBP18.59■□□□□ 0.57
COPS3-212ENST00000539941 CBX1P83916 185 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 TRIM14Q14142 442 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 TAF1CQ15572 869 aaPredicted RBP18.59■□□□□ 0.57
COPS3-212ENST00000539941 NFIL3Q16649 462 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 PLA2G4FQ68DD2 849 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 ARMCX5Q6P1M9 558 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 MAMDC4Q6UXC1 1216 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 FBXO16Q8IX29 292 aaPredicted RBP18.59■□□□□ 0.57
COPS3-212ENST00000539941 MCPH1Q8NEM0 835 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 AFAP1L1Q8TED9 768 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 CEP170P1Q96L14 293 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 STRA6Q9BX79 667 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 ST6GALNAC4Q9H4F1 302 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 TMEM51Q9NW97 253 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 SLC5A4Q9NY91 659 aa18.59■□□□□ 0.57
COPS3-212ENST00000539941 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.59■□□□□ 0.57
COPS3-212ENST00000539941 CETN3O15182 167 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 PPP1R37O75864 691 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 RPL13P26373 211 aaKnown RBP18.58■□□□□ 0.57
COPS3-212ENST00000539941 NMT1P30419 496 aaKnown RBP18.58■□□□□ 0.57
COPS3-212ENST00000539941 NPEPPSP55786 919 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 UBXN1Q04323 297 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 SREBF2Q12772 1141 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 LRMPQ12912 555 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 NOLC1Q14978 699 aaKnown RBP eCLIP18.58■□□□□ 0.57
COPS3-212ENST00000539941 LY6KQ17RY6 165 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 CCDC112Q8NEF3 446 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 KIFAP3Q92845 792 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 CYP26B1Q9NR63 512 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 OGFRQ9NZT2 677 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 SEPT9Q9UHD8 586 aaPredicted RBP18.58■□□□□ 0.57
COPS3-212ENST00000539941 TELO2Q9Y4R8 837 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 PPME1Q9Y570 386 aa18.58■□□□□ 0.57
COPS3-212ENST00000539941 RBM47A0AV96 593 aaKnown RBP18.57■□□□□ 0.56
COPS3-212ENST00000539941 TMEM150BA6NC51 233 aa18.57■□□□□ 0.56
COPS3-212ENST00000539941 ARIH2O95376 493 aa18.57■□□□□ 0.56
COPS3-212ENST00000539941 OATP04181 439 aa18.57■□□□□ 0.56
COPS3-212ENST00000539941 RTP1P59025 263 aa18.57■□□□□ 0.56
COPS3-212ENST00000539941 ARID5BQ14865 1188 aa18.57■□□□□ 0.56
COPS3-212ENST00000539941 MAN2A1Q16706 1144 aa18.57■□□□□ 0.56
COPS3-212ENST00000539941 DPP9Q86TI2 863 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms