RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 HOXD13P35453 343 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 UBXN1Q04323 297 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 KCTD2Q14681 263 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 RAD9BQ6WBX8 426 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 LRRC55Q6ZSA7 311 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 CYFIP1Q7L576 1253 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 EEPD1Q7L9B9 569 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 ANKRD13CQ8N6S4 541 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 FGD4Q96M96 766 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 PARVGQ9HBI0 331 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 LZTFL1Q9NQ48 299 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 KCND2Q9NZV8 630 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 GABBR1Q9UBS5 961 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 DBR1Q9UK59 544 aaKnown RBP18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 ADGRG1Q9Y653 693 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 PES1O00541 588 aaKnown RBP18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 ICAM3P32942 547 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 PPFIBP1Q86W92 1011 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 FAM114A1Q8IWE2 563 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 TXLNBQ8N3L3 684 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 RDM1Q8NG50 284 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 NAA15Q9BXJ9 866 aaKnown RBP18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 MROH8Q9H579 483 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 GCNT3O95395 438 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 GAP43P17677 238 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 GUCY2CP25092 1073 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 NMT1P30419 496 aaKnown RBP18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 COPB2P35606 906 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 MTIF2P46199 727 aaKnown RBP18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 ACTR2P61160 394 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 RBL2Q08999 1139 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 SWSAP1Q6NVH7 229 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 PTPN18Q99952 460 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 OLFML3Q9NRN5 406 aa18.78■□□□□ 0.6
PCDHB17P-201ENST00000539533 DNAJC25-GNG10A0A024R161 153 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 CCDC151A5D8V7 595 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 HIP1RO75146 1068 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 ZNF131P52739 623 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 NPEPPSP55786 919 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 CHMP4BP1P59074 171 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 KCNA1Q09470 495 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 PLA2G4FQ68DD2 849 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 SRGAP1Q7Z6B7 1085 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 DAW1Q8N136 415 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 GPRC5AQ8NFJ5 357 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 CPLX3Q8WVH0 158 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 LGALS16A8MUM7 142 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 B4DLN1 442 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 SOCS7O14512 581 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 BACH1O14867 736 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 ZNF862O60290 1169 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 FKBP3Q00688 224 aaKnown RBP18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 MAPK7Q13164 816 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 BRD3Q15059 726 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 LONRF2Q1L5Z9 754 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 FOXR2Q6PJQ5 311 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 ANO5Q75V66 913 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 ZNF507Q8TCN5 953 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 FIZ1Q96SL8 496 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 ODF2LQ9ULJ1 636 aa18.77■□□□□ 0.6
PCDHB17P-201ENST00000539533 LOXHD1Q8IVV2 1947 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 KIF5CO60282 957 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 USO1O60763 962 aaKnown RBP18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 HUNKP57058 714 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 KNOP1Q1ED39 458 aaKnown RBP18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 ZC2HC1CQ53FD0 456 aaPredicted RBP18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 ABHD15Q6UXT9 468 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 ANKRD23Q86SG2 305 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 CCDC60Q8IWA6 550 aaPredicted RBP18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 SLC45A1Q9Y2W3 748 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 A0A0U1RQJ8 604 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 FGFR1OPO95684 399 aaKnown RBP18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 PSAPP07602 524 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 ZBTB48P10074 688 aaPredicted RBP18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 XKR9Q5GH70 373 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 MIIPQ5JXC2 388 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 ODR4Q5SWX8 454 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 SHCBP1Q8NEM2 672 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 ATRIPQ8WXE1 791 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 NOC4LQ9BVI4 516 aaKnown RBP18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 WDR81Q562E7 1941 aa18.76■□□□□ 0.59
PCDHB17P-201ENST00000539533 MFAP3LO75121 409 aa18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 UBA1P22314 1058 aaKnown RBP18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 GPS2Q13227 327 aa18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 KSR1Q8IVT5 923 aa18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 CCDC43Q96MW1 224 aaKnown RBP18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 IKZF4Q9H2S9 585 aa18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 CDC23Q9UJX2 597 aa18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 ZNFX1Q9P2E3 1918 aaKnown RBP18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 STBD1O95210 358 aa18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 BMT2Q1RMZ1 405 aa18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 CHADLQ6NUI6 762 aa18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 ZNF720Q7Z2F6 126 aa18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 FAM178BQ8IXR5 827 aa18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 GTF3C2Q8WUA4 911 aaPredicted RBP18.75■□□□□ 0.59
PCDHB17P-201ENST00000539533 ITIH6Q6UXX5 1313 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 GYPCP04921 128 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 CASP14P31944 242 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 ADAM9Q13443 819 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms