RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 LRFN2Q9ULH4 789 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 PCDHB13Q9Y5F0 798 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SRPRBQ9Y5M8 271 aaKnown RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CNTNAP2Q9UHC6 1331 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 A0A1W2PQ45 241 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 A0A1W2PQY0 241 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 BTBD18B2RXH4 712 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 N4BP3O15049 544 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 STX10O60499 249 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CAVIN2O95810 425 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 IGHA2P01877 340 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CYP2C9P11712 490 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CPA1P15085 419 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 KCNA2P16389 499 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SYT1P21579 422 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 MCM7P33993 719 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ME1P48163 572 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 NASPP49321 788 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CBX1P83916 185 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 PURAQ00577 322 aaKnown RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 IKBKEQ14164 716 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SLC39A14Q15043 492 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 PUS10Q3MIT2 529 aaKnown RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 DCAF4L1Q3SXM0 396 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 XKR9Q5GH70 373 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CNKSR3Q6P9H4 555 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CABP7Q86V35 215 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 RAB11FIP4Q86YS3 637 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 FMNL3Q8IVF7 1028 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SLC43A3Q8NBI5 491 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 DEPTORQ8TB45 409 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 URGCPQ8TCY9 931 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 MTRQ99707 1265 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 TSG101Q99816 390 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 TTC12Q9H892 705 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 GTF2IRD1Q9UHL9 959 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 TUBE1Q9UJT0 475 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 KCNJ14Q9UNX9 436 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ATP11BQ9Y2G3 1177 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 HAS3O00219 553 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 NCK2O43639 380 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 PSMD10O75832 226 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 ERLIN2O94905 339 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 LDHAP00338 332 aaKnown RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 SKILP12757 684 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 BMP8BP34820 402 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 STAT6P42226 847 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 TXKP42681 527 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 SNAP25P60880 206 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 DMP1Q13316 513 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 GRIK4Q16099 956 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 PTGISQ16647 500 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 KIAA0753Q2KHM9 967 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 NAALADL2Q58DX5 795 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 GPR153Q6NV75 609 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 ABHD15Q6UXT9 468 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 HS2ST1Q7LGA3 356 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 CEP170P1Q96L14 293 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 TIGD1Q96MW7 591 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 ARPC5LQ9BPX5 153 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 OXCT2Q9BYC2 517 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 TNMDQ9H2S6 317 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 TMEM206Q9H813 350 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 DDX19AQ9NUU7 478 aaKnown RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 GABBR1Q9UBS5 961 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 SEPT9Q9UHD8 586 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 SSUH2Q9Y2M2 353 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 RSPH10B2B2RC85 870 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 MSH4O15457 936 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 PPP1R11O60927 126 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 IPO7O95373 1038 aaKnown RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 RSPH10BP0C881 870 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 ATP2B1P20020 1258 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 CCND3P30281 292 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 CRYBB1P53674 252 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 CCL14Q16627 93 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 SHROOM1Q2M3G4 852 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 PDE12Q6L8Q7 609 aaKnown RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 EEPD1Q7L9B9 569 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 ABI1Q8IZP0 508 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 TTC39CQ8N584 583 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 SPIRE2Q8WWL2 714 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 PAWRQ96IZ0 340 aaKnown RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 FAM81BQ96LP2 452 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 NFKBIZQ9BYH8 718 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 FTOQ9C0B1 505 aaKnown RBP eCLIP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 LMAN2LQ9H0V9 348 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 HIPK3Q9H422 1215 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 IL23AQ9NPF7 189 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 TOPORSQ9NS56 1045 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 FAM50BQ9Y247 325 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 MAFBQ9Y5Q3 323 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-211ENST00000538253 IGSF9BQ9UPX0 1349 aa3.95□□□□□ -1.78
PTPN22-211ENST00000538253 IGKV6D-21A0A0A0MT36 114 aa3.94□□□□□ -1.78
PTPN22-211ENST00000538253 PVALEFA0A1B0GWK0 134 aa3.94□□□□□ -1.78
PTPN22-211ENST00000538253 PPP1R12AO14974 1030 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-211ENST00000538253 KIF1CO43896 1103 aaKnown RBP3.94□□□□□ -1.78
PTPN22-211ENST00000538253 JAK2O60674 1132 aa3.94□□□□□ -1.78
PTPN22-211ENST00000538253 TIMP1P01033 207 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms