RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 CDO1Q16878 200 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 OR6B3Q8NGW1 331 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 SAAL1Q96ER3 474 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 FAM167AQ96KS9 214 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 DNAJC17Q9NVM6 304 aaKnown RBP13.22□□□□□ -0.29
CIT-208ENST00000537607 ANAPC7Q9UJX3 599 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 USP27XA6NNY8 438 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 APOBEC3FQ8IUX4 373 aaKnown RBP13.22□□□□□ -0.29
CIT-208ENST00000537607 PASD1Q8IV76 773 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 LRRC8CQ8TDW0 803 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 CCSER1Q9C0I3 900 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 ACAD9Q9H845 621 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 MAGED2Q9UNF1 606 aaPredicted RBP13.22□□□□□ -0.29
CIT-208ENST00000537607 CAPN7Q9Y6W3 813 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 IQSEC2Q5JU85 1478 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 PSMC5P62195 406 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 DR1Q01658 176 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 ZKSCAN8Q15776 578 aaPredicted RBP13.22□□□□□ -0.29
CIT-208ENST00000537607 NAALADL2Q58DX5 795 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 DARS2Q6PI48 645 aaKnown RBP13.22□□□□□ -0.29
CIT-208ENST00000537607 TMEM270Q6UE05 265 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 RPAP3Q9H6T3 665 aaPredicted RBP13.22□□□□□ -0.29
CIT-208ENST00000537607 TBK1Q9UHD2 729 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 ADGRG1Q9Y653 693 aa13.22□□□□□ -0.29
CIT-208ENST00000537607 ZNF18P17022 549 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 RASSF2P50749 326 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 CASP8Q14790 479 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 RPS6KA2Q15349 733 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 ZNF568Q3ZCX4 644 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 C4orf50Q6ZRC1 276 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 DNAAF3Q8N9W5 541 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 FMO2Q99518 471 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 CCDC68Q9H2F9 335 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 ZNF302Q9NR11 478 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 SEL1LQ9UBV2 794 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 NFU1Q9UMS0 254 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 KLRK1P26718 216 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 ANKRD40Q6AI12 368 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 NXNQ6DKJ4 435 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 ZNF746Q6NUN9 644 aaPredicted RBP13.21□□□□□ -0.29
CIT-208ENST00000537607 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.29
CIT-208ENST00000537607 SPATA31A5Q5VU36 1347 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 SPATA31A7Q8IWB4 1347 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 CTDNEP1O95476 244 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.29
CIT-208ENST00000537607 TACC3Q9Y6A5 838 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 LRRIQ1Q96JM4 1722 aa13.21□□□□□ -0.29
CIT-208ENST00000537607 VAMP7P51809 220 aa13.21□□□□□ -0.3
CIT-208ENST00000537607 BARGINQ6ZT62 677 aa13.21□□□□□ -0.3
CIT-208ENST00000537607 CYFIP1Q7L576 1253 aa13.21□□□□□ -0.3
CIT-208ENST00000537607 KIAA1586Q9HCI6 787 aa13.21□□□□□ -0.3
CIT-208ENST00000537607 LIG3P49916 1009 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 MTMR2Q13614 643 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 PDIA5Q14554 519 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 DRAP1Q14919 205 aaPredicted RBP13.2□□□□□ -0.3
CIT-208ENST00000537607 BBS9Q3SYG4 887 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 KIAA1841Q6NSI8 718 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 EP400NLQ6ZTU2 488 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 C2orf69Q8N8R5 385 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 C11orf70Q9BRQ4 267 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 ZWILCHQ9H900 591 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 SMYD2Q9NRG4 433 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 EIF3CLB5ME19 914 aaKnown RBP13.2□□□□□ -0.3
CIT-208ENST00000537607 CSPG5O95196 566 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 NMT1P30419 496 aaKnown RBP13.2□□□□□ -0.3
CIT-208ENST00000537607 AGLP35573 1532 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 HAUS6Q7Z4H7 955 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 RHPN2Q8IUC4 686 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 MICALL2Q8IY33 904 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 TMEM35BQ8NCS4 154 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 EIF3CQ99613 913 aaKnown RBP13.2□□□□□ -0.3
CIT-208ENST00000537607 LRFN2Q9ULH4 789 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 PDHBP11177 359 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 KCNB1Q14721 858 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 EPHA7Q15375 998 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 C16orf86Q6ZW13 317 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 ARMCX2Q7L311 632 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 GIMAP8Q8ND71 665 aaPredicted RBP13.2□□□□□ -0.3
CIT-208ENST00000537607 MTRQ99707 1265 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 PCDHA10Q9Y5I2 948 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 KIDINS220Q9ULH0 1771 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 MTF1Q14872 753 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 DSTYKQ6XUX3 929 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 TACO1Q9BSH4 297 aaKnown RBP13.2□□□□□ -0.3
CIT-208ENST00000537607 SCINQ9Y6U3 715 aa13.2□□□□□ -0.3
CIT-208ENST00000537607 CEP170BQ9Y4F5 1589 aaPredicted RBP13.19□□□□□ -0.3
CIT-208ENST00000537607 ARHGAP42A6NI28 874 aa13.19□□□□□ -0.3
CIT-208ENST00000537607 CPP00450 1065 aa13.19□□□□□ -0.3
CIT-208ENST00000537607 GSTA1P08263 222 aa13.19□□□□□ -0.3
CIT-208ENST00000537607 GSTA2P09210 222 aa13.19□□□□□ -0.3
CIT-208ENST00000537607 PSMA2P25787 234 aa13.19□□□□□ -0.3
CIT-208ENST00000537607 ECE1P42892 770 aa13.19□□□□□ -0.3
CIT-208ENST00000537607 FMR1Q06787 632 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■□□□□ 10.8
CIT-208ENST00000537607 TMED2Q15363 201 aa13.19□□□□□ -0.3
CIT-208ENST00000537607 PPP6R3Q5H9R7 873 aaPredicted RBP13.19□□□□□ -0.3
CIT-208ENST00000537607 HHIPL2Q6UWX4 724 aa13.19□□□□□ -0.3
CIT-208ENST00000537607 HEMGNQ9BXL5 484 aa13.19□□□□□ -0.3
CIT-208ENST00000537607 CNOT7Q9UIV1 285 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms