RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 RPUSD2Q8IZ73 545 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 SNX29Q8TEQ0 813 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TMEM40Q8WWA1 233 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RNPC3Q96LT9 517 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 DHX33Q9H6R0 707 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 SUGCTQ9HAC7 445 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 XPNPEP1Q9NQW7 623 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 BMP2KQ9NSY1 1161 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 ANKEF1Q9NU02 776 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TRPV2Q9Y5S1 764 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TRIOBPQ9H2D6 2365 aa12.65□□□□□ -0.38
TNFRSF1A-208ENST00000536194 KDM3AQ9Y4C1 1321 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 BRD1O95696 1058 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 PDIA4P13667 645 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 MARCKSP29966 332 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 KIZQ2M2Z5 673 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 IER5Q5VY09 327 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 HAUS3Q68CZ6 603 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 OTUD6AQ7L8S5 288 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 KCNK18Q7Z418 384 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 NME8Q8N427 588 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 DBF4BQ8NFT6 615 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ERMNQ8TAM6 284 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ZNF668Q96K58 619 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CELF4Q9BZC1 486 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 RAB34Q9BZG1 259 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ADAMTS10Q9H324 1103 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 AGO3Q9H9G7 860 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 FBXO2Q9UK22 296 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 AKT3Q9Y243 479 aa12.64□□□□□ -0.39
TNFRSF1A-208ENST00000536194 RPLP2P05387 115 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 MUTP22033 750 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 DDIT3P35638 169 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 RFC5P40937 340 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 POLGP54098 1239 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 EMC2Q15006 297 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SLC39A14Q15043 492 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 LRIT3Q3SXY7 679 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 FOXD4L6Q3SYB3 417 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 HYIQ5T013 277 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CNKSR3Q6P9H4 555 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 FOXD4L3Q6VB84 417 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 LRRC15Q8TF66 581 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CHAMP1Q96JM3 812 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 PNMA5Q96PV4 448 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 OSMRQ99650 979 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 DDX19AQ9NUU7 478 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 KIAA1024Q9UPX6 916 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 GINS2Q9Y248 185 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 PPME1Q9Y570 386 aa12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 MORC2Q9Y6X9 1032 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1A-208ENST00000536194 GRXCR1A8MXD5 290 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 E9PMD0 336 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 M0QZ92 97 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SLC34A2O95436 690 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 XRCC6P12956 609 aaKnown RBP eCLIP12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 TMOD1P28289 359 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CD52P31358 61 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 GPC3P51654 580 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 NLRP11P59045 1033 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 GRB10Q13322 594 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SPECC1Q5M775 1068 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 KRT79Q5XKE5 535 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 TSHZ1Q6ZSZ6 1077 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 USP49Q70CQ1 688 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 KSR1Q8IVT5 923 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 LINC00301Q8NCQ3 95 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SLC7A3Q8WY07 619 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 TMEM143Q96AN5 459 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 LRCH3Q96II8 777 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CLIC6Q96NY7 704 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 NACC1Q96RE7 527 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 MAP7D2Q96T17 732 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 IFIH1Q9BYX4 1025 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CSRNP2Q9H175 543 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 DBR1Q9UK59 544 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SRPRBQ9Y5M8 271 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SQORQ9Y6N5 450 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 LAMA3Q16787 3333 aa12.62□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ZBBXA8MT70 800 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 USO1O60763 962 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 DGAT1O75907 488 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 BAIAP3O94812 1187 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ACTN1P12814 892 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 LONP1P36776 959 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 FXR1P51114 621 aaKnown RBP eCLIP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CRYBB1P53674 252 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 WDR5P61964 334 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 DEFB103AP81534 67 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 DNM1Q05193 864 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 TMEM119Q4V9L6 283 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 FAM228AQ86W67 206 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 LINC01599Q8WXQ3 324 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SEPT8Q92599 483 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 AK8Q96MA6 479 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ZNF396Q96N95 335 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 PLIN2Q99541 437 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms