RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	HFE2	Q6ZVN8	426 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	SLC24A5	Q71RS6	500 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	MICU3	Q86XE3	530 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	POF1B	Q8WVV4	589 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	FBXL18	Q96ME1	805 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	ERVK-5	Q9HDB9	667 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	AAAS	Q9NRG9	546 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	LRFN2	Q9ULH4	789 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	PCDHB7	Q9Y5E2	793 aa		13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647		V9GY48	417 aa	Predicted RBP	13.13	□□□□□ -0.31
CTNND1-238	ENST00000534647	SMCO2	A6NFE2	343 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	LOC730098	B7Z3J9	87 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647		C9IYK1	514 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	GPR182	O15218	404 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	NDUFV1	P49821	464 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	NHLH1	Q02575	133 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	CLUL1	Q15846	466 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	PKN1	Q16512	942 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	MCTP2	Q6DN12	878 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	DHX32	Q7L7V1	743 aa	Known RBP	13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	ADGRD2	Q7Z7M1	963 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	ALYREF	Q86V81	257 aa	Known RBP	13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	SKAP1	Q86WV1	359 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	RAB11FIP4	Q86YS3	637 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	ZNF710	Q8N1W2	664 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	NEK1	Q96PY6	1258 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	CDCA3	Q99618	268 aa	Predicted RBP	13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	LRRC2	Q9BYS8	371 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	ELAC1	Q9H777	363 aa	Known RBP	13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	MUTYH	Q9UIF7	546 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	BRPF3	Q9ULD4	1205 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	NOC2L	Q9Y3T9	749 aa	Known RBP	13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	PCDHB12	Q9Y5F1	795 aa		13.12	□□□□□ -0.31
CTNND1-238	ENST00000534647	ATG2A	Q2TAZ0	1938 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	IGLV3-22	A0A075B6J6	115 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	ZBTB42	B2RXF5	422 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	ZBTB43	O43298	467 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	MGEA5	O60502	916 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	RPS6KA5	O75582	802 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	GLP2R	O95838	553 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	ATF7	P17544	494 aa	Predicted RBP	13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	ATP4A	P20648	1035 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	NRIP1	P48552	1158 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	CRYBB1	P53674	252 aa	Predicted RBP	13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	FOXK1	P85037	733 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	NFX1	Q12986	1120 aa	Known RBP	13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	PTGDR	Q13258	359 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	RTN1	Q16799	776 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	PAN2	Q504Q3	1202 aa	Known RBP	13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	MIS18BP1	Q6P0N0	1132 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	TMEM184A	Q6ZMB5	413 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	TMEM40	Q8WWA1	233 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	ADAM2	Q99965	735 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	CDHR5	Q9HBB8	845 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	ANO2	Q9NQ90	1003 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	ZNF302	Q9NR11	478 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	TBC1D22B	Q9NU19	505 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	TMEM161A	Q9NX61	479 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	ST3GAL5	Q9UNP4	418 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	LZTS1	Q9Y250	596 aa		13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.11	□□□□□ -0.31
CTNND1-238	ENST00000534647	ESYT2	A0FGR8	921 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	DENND3	A2RUS2	1198 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	FAM86B1	E9PN63	330 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	IPO5	O00410	1097 aa	Known RBP	13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	BACH1	O14867	736 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	GPR32	O75388	356 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	C22orf31	O95567	290 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	FAM86B2	P0C5J1	330 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	ZNF76	P36508	570 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	MRE11	P49959	708 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	KCNC3	Q14003	757 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	DSC3	Q14574	896 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	TMEM266	Q2M3C6	531 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	SWSAP1	Q6NVH7	229 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	PDXDC2P	Q6P474	469 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	TRIM67	Q6ZTA4	783 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	PLA2G4D	Q86XP0	818 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	RASGRP4	Q8TDF6	673 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	SUSD6	Q92537	303 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	PGBD1	Q96JS3	809 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	PHF7	Q9BWX1	381 aa	Predicted RBP	13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	TLE6	Q9H808	572 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	TLR9	Q9NR96	1032 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	TMEM260	Q9NX78	707 aa		13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	RBM19	Q9Y4C8	960 aa	Known RBP	13.1	□□□□□ -0.31
CTNND1-238	ENST00000534647	FSCN2	O14926	492 aa		13.09	□□□□□ -0.31
CTNND1-238	ENST00000534647	FGF18	O76093	207 aa		13.09	□□□□□ -0.31
CTNND1-238	ENST00000534647	GATM	P50440	423 aa		13.09	□□□□□ -0.31
CTNND1-238	ENST00000534647	ZXDA	P98168	799 aa		13.09	□□□□□ -0.31
CTNND1-238	ENST00000534647	PLCB3	Q01970	1234 aa		13.09	□□□□□ -0.31
CTNND1-238	ENST00000534647	DUSP6	Q16828	381 aa		13.09	□□□□□ -0.31
CTNND1-238	ENST00000534647	PFKFB3	Q16875	520 aa	Predicted RBP	13.09	□□□□□ -0.31
CTNND1-238	ENST00000534647	BMP2KL	Q5H9B9	411 aa		13.09	□□□□□ -0.31
CTNND1-238	ENST00000534647	FAM102B	Q5T8I3	360 aa		13.09	□□□□□ -0.31
CTNND1-238	ENST00000534647	RBM23	Q86U06	439 aa	Known RBP	13.09	□□□□□ -0.31
CTNND1-238	ENST00000534647	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms