RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 LRRC41Q15345 812 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 L1TD1Q5T7N2 865 aaKnown RBP17.68■□□□□ 0.42
TRIM3-213ENST00000533309 MAEAQ7L5Y9 396 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 GUF1Q8N442 669 aaKnown RBP17.68■□□□□ 0.42
TRIM3-213ENST00000533309 ENOX1Q8TC92 643 aaKnown RBP17.68■□□□□ 0.42
TRIM3-213ENST00000533309 BBXQ8WY36 941 aaPredicted RBP17.68■□□□□ 0.42
TRIM3-213ENST00000533309 DHX33Q9H6R0 707 aaKnown RBP17.68■□□□□ 0.42
TRIM3-213ENST00000533309 GPRC5CQ9NQ84 441 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 NRBP2Q9NSY0 501 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 Q9Y3F1 56 aa17.68■□□□□ 0.42
TRIM3-213ENST00000533309 PMS1P54277 932 aaKnown RBP17.67■□□□□ 0.42
TRIM3-213ENST00000533309 STX17P56962 302 aa17.67■□□□□ 0.42
TRIM3-213ENST00000533309 EPM2AIP1Q7L775 607 aaPredicted RBP17.67■□□□□ 0.42
TRIM3-213ENST00000533309 NELFBQ8WX92 580 aa17.67■□□□□ 0.42
TRIM3-213ENST00000533309 ERAP1Q9NZ08 941 aa17.67■□□□□ 0.42
TRIM3-213ENST00000533309 SEL1LQ9UBV2 794 aa17.67■□□□□ 0.42
TRIM3-213ENST00000533309 RWDD2AQ9UIY3 292 aa17.67■□□□□ 0.42
TRIM3-213ENST00000533309 PSMA7O14818 248 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 AP5Z1O43299 807 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 ADCY3O60266 1144 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 PPP1R2P41236 205 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 SOX10P56693 466 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 STIM1Q13586 685 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 DGKDQ16760 1214 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 MAP3K21Q5TCX8 1036 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 MYCT1Q8N699 235 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 SCFD1Q8WVM8 642 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 DHTKD1Q96HY7 919 aaPredicted RBP17.66■□□□□ 0.42
TRIM3-213ENST00000533309 RNPEPQ9H4A4 650 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 ATP6V0A4Q9HBG4 840 aa17.66■□□□□ 0.42
TRIM3-213ENST00000533309 TRIM49BA6NDI0 452 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 SMTNL1A8MU46 457 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 GOLGA6L19H0YKK7 550 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 DUSP11O75319 330 aaKnown RBP17.65■□□□□ 0.42
TRIM3-213ENST00000533309 HMGCRP04035 888 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 PRKAR2AP13861 404 aaKnown RBP17.65■□□□□ 0.42
TRIM3-213ENST00000533309 EMC2Q15006 297 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 MCPH1Q8NEM0 835 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 DRC1Q96MC2 740 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 WBP1LQ9NX94 342 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 NFE2L3Q9Y4A8 694 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 FRMPD3Q5JV73 1810 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 SEPT4O43236 478 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 MYBP10242 640 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 PLS3P13797 630 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 CCNE1P24864 410 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 NMT1P30419 496 aaKnown RBP17.65■□□□□ 0.42
TRIM3-213ENST00000533309 RFC5P40937 340 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 POLGP54098 1239 aaPredicted RBP17.65■□□□□ 0.42
TRIM3-213ENST00000533309 ODR4Q5SWX8 454 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 FAM102BQ5T8I3 360 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 SPATA1Q5VX52 437 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 CENPPQ6IPU0 288 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 TTI2Q6NXR4 508 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 MYOCDQ8IZQ8 938 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 RAET1EQ8TD07 263 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 PXYLP1Q8TE99 480 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 P2RX5Q93086 422 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 SEMA6BQ9H3T3 888 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 MRPL44Q9H9J2 332 aaKnown RBP17.65■□□□□ 0.42
TRIM3-213ENST00000533309 FANCLQ9NW38 375 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 TRPC6Q9Y210 931 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 PPME1Q9Y570 386 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 SIP14410 1827 aa17.65■□□□□ 0.42
TRIM3-213ENST00000533309 H3BRB1 525 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 HBP1O60381 514 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 MAFO75444 373 aaPredicted RBP17.64■□□□□ 0.41
TRIM3-213ENST00000533309 CCND3P30281 292 aaPredicted RBP17.64■□□□□ 0.41
TRIM3-213ENST00000533309 HOXD13P35453 343 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 BMT2Q1RMZ1 405 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 FAM178BQ8IXR5 827 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 DNAJC5GQ8N7S2 189 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 BSNDQ8WZ55 320 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 KIFAP3Q92845 792 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 BEGAINQ9BUH8 593 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 STRA6Q9BX79 667 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 AP5M1Q9H0R1 490 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 TUT1Q9H6E5 874 aaKnown RBP17.64■□□□□ 0.41
TRIM3-213ENST00000533309 LARSQ9P2J5 1176 aaKnown RBP17.64■□□□□ 0.41
TRIM3-213ENST00000533309 ZNF215Q9UL58 517 aaPredicted RBP17.64■□□□□ 0.41
TRIM3-213ENST00000533309 SCN10AQ9Y5Y9 1956 aa17.64■□□□□ 0.41
TRIM3-213ENST00000533309 MYADML2A6NDP7 307 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 PPP1R37O75864 691 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 F2P00734 622 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 ZNF18P17022 549 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 CPT1AP50416 773 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 PRMT2P55345 433 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 BEX3Q00994 111 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 ARHGEF6Q15052 776 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 ZCWPW2Q504Y3 356 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 ZNF720Q7Z2F6 126 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 TRAPPC12Q8WVT3 735 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 SLC7A3Q8WY07 619 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 KAT2BQ92831 832 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 DUSP9Q99956 384 aaKnown RBP17.63■□□□□ 0.41
TRIM3-213ENST00000533309 UPF3AQ9H1J1 476 aaKnown RBP17.63■□□□□ 0.41
TRIM3-213ENST00000533309 BRCA2P51587 3418 aa17.63■□□□□ 0.41
TRIM3-213ENST00000533309 TRIP12Q14669 1992 aaPredicted RBP17.63■□□□□ 0.41
TRIM3-213ENST00000533309 IGKV6-21A0A0C4DH24 114 aa17.62■□□□□ 0.41
TRIM3-213ENST00000533309 GCNT3O95395 438 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms