RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 TMEM31Q5JXX7 168 aa15.06■□□□□ 0
AMBRA1-210ENST00000531542 B3GNT9Q6UX72 402 aa15.06■□□□□ 0
AMBRA1-210ENST00000531542 MBOAT7Q96N66 472 aa15.06■□□□□ 0
AMBRA1-210ENST00000531542 NCOA5Q9HCD5 579 aaKnown RBP15.06■□□□□ 0
AMBRA1-210ENST00000531542 TMEM161AQ9NX61 479 aa15.06■□□□□ 0
AMBRA1-210ENST00000531542 CLDND1Q9NY35 253 aa15.06■□□□□ 0
AMBRA1-210ENST00000531542 SAMM50Q9Y512 469 aa15.06■□□□□ 0
AMBRA1-210ENST00000531542 DENND3A2RUS2 1198 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 C19orf67A6NJJ6 358 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 ZNF862O60290 1169 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 GAS7O60861 476 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 PSMD10O75832 226 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 OATP04181 439 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 ALADP13716 330 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 CDC42EP1Q00587 391 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 ADAM15Q13444 863 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 SMAD2Q15796 467 aaKnown RBP15.05■□□□□ -0
AMBRA1-210ENST00000531542 KIZQ2M2Z5 673 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 CPLX2Q6PUV4 134 aaKnown RBP15.05■□□□□ -0
AMBRA1-210ENST00000531542 FAM228AQ86W67 206 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 METTL13Q8N6R0 699 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 KLHL23Q8NBE8 558 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 TBCKQ8TEA7 893 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 KHSRPQ92945 711 aaKnown RBP eCLIP15.05■□□□□ -0
AMBRA1-210ENST00000531542 LRFN3Q9BTN0 628 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 ADAMTS10Q9H324 1103 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 ALG13Q9NP73 1137 aaKnown RBP15.05■□□□□ -0
AMBRA1-210ENST00000531542 AAASQ9NRG9 546 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 GINS2Q9Y248 185 aa15.05■□□□□ -0
AMBRA1-210ENST00000531542 NLRC5Q86WI3 1866 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 FSD2A1L4K1 749 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 CPLX1O14810 134 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 EYA4O95677 639 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 EIF4BP23588 611 aaKnown RBP15.04■□□□□ -0
AMBRA1-210ENST00000531542 DNAJB1P25685 340 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 ZP2Q05996 745 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 TARBP2Q15633 366 aaKnown RBP15.04■□□□□ -0
AMBRA1-210ENST00000531542 NPY5RQ15761 445 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 LRCH2Q5VUJ6 765 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 PDE12Q6L8Q7 609 aaKnown RBP15.04■□□□□ -0
AMBRA1-210ENST00000531542 EFCAB12Q6NXP0 572 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 ADHFE1Q8IWW8 467 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 BLIDQ8IZY5 108 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 EFHBQ8N7U6 833 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 MAP7D2Q96T17 732 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 OSMRQ99650 979 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 TEKT3Q9BXF9 490 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 NIFKQ9BYG3 293 aaKnown RBP15.04■□□□□ -0
AMBRA1-210ENST00000531542 C11orf16Q9NQ32 467 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 PCDHB12Q9Y5F1 795 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 MYO7AQ13402 2215 aa15.04■□□□□ -0
AMBRA1-210ENST00000531542 HOXA2O43364 376 aa15.03■□□□□ -0
AMBRA1-210ENST00000531542 VTNP04004 478 aa15.03■□□□□ -0
AMBRA1-210ENST00000531542 NLRP11P59045 1033 aaKnown RBP15.03■□□□□ -0
AMBRA1-210ENST00000531542 PRKCEQ02156 737 aa15.03■□□□□ -0
AMBRA1-210ENST00000531542 PAN2Q504Q3 1202 aaKnown RBP15.03■□□□□ -0
AMBRA1-210ENST00000531542 POF1BQ8WVV4 589 aa15.03■□□□□ -0
AMBRA1-210ENST00000531542 RSPH1Q8WYR4 309 aa15.03■□□□□ -0
AMBRA1-210ENST00000531542 UIMC1Q96RL1 719 aa15.03■□□□□ -0
AMBRA1-210ENST00000531542 UNC45AQ9H3U1 944 aa15.03■□□□□ -0
AMBRA1-210ENST00000531542 ATP6V0A4Q9HBG4 840 aa15.03■□□□□ -0
AMBRA1-210ENST00000531542 LZTS1Q9Y250 596 aa15.03■□□□□ -0
AMBRA1-210ENST00000531542 IGKV6-21A0A0C4DH24 114 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 PPFIA3O75145 1194 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 TBX10O75333 385 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 GATMP50440 423 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 GPC3P51654 580 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 CLCN3P51790 818 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 DLX2Q07687 328 aaPredicted RBP15.02■□□□□ -0
AMBRA1-210ENST00000531542 COASYQ13057 564 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 SMAD4Q13485 552 aaKnown RBP15.02■□□□□ -0
AMBRA1-210ENST00000531542 XKR3Q5GH77 459 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 FAM102BQ5T8I3 360 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 ETNPPLQ8TBG4 499 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 MSLNLQ96KJ4 702 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 CEP89Q96ST8 783 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 POP1Q99575 1024 aaKnown RBP15.02■□□□□ -0
AMBRA1-210ENST00000531542 TRAIPQ9BWF2 469 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 TMEM117Q9H0C3 514 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 AKT3Q9Y243 479 aa15.02■□□□□ -0
AMBRA1-210ENST00000531542 TBKBP1A7MCY6 615 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 PRR33A8MZF0 331 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 MBTPS2O43462 519 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 CDKL5O76039 1030 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 STBD1O95210 358 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 DARSP14868 501 aaKnown RBP15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 ZSCAN20P17040 1043 aaPredicted RBP15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 LAG3P18627 525 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 SSTR3P32745 418 aaPredicted RBP15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 IRS1P35568 1242 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 PLCB3Q01970 1234 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 TBC1D8BQ0IIM8 1120 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 NONOQ15233 471 aaKnown RBP eCLIP15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 UGCGQ16739 394 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 PPP4R3AQ6IN85 833 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 EP400NLQ6ZTU2 488 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 MIER3Q7Z3K6 550 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 KRT25Q7Z3Z0 450 aa15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 CDCA3Q99618 268 aaPredicted RBP15.01□□□□□ -0.01
AMBRA1-210ENST00000531542 UPF3BQ9BZI7 483 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms