RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 DSC3Q14574 896 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 DUSP6Q16828 381 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 PFKFB3Q16875 520 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-219ENST00000530495 KIZQ2M2Z5 673 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 JAKMIP3Q5VZ66 844 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 MCTP2Q6DN12 878 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 ZNF746Q6NUN9 644 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-219ENST00000530495 TMEM184AQ6ZMB5 413 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 COLGALT1Q8NBJ5 622 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 ZNF577Q9BSK1 485 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 ATP6V0A4Q9HBG4 840 aa16.95■□□□□ 0.3
CAPN1-219ENST00000530495 TMEM221A6NGB7 291 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 GOLGA8AA7E2F4 631 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 GOLGA8BA8MQT2 603 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 M0R296 226 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 FSCN2O14926 492 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 ZXDAP98168 799 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 RBM10P98175 930 aaKnown RBP16.94■□□□□ 0.3
CAPN1-219ENST00000530495 KCNC3Q14003 757 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 PKN1Q16512 942 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 ADCK5Q3MIX3 580 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 FAM228AQ86W67 206 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 CKAP2LQ8IYA6 745 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 SMAP1Q8IYB5 467 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-219ENST00000530495 THNSL1Q8IYQ7 743 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 RASEFQ8IZ41 740 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 VN1R2Q8NFZ6 395 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 SUSD6Q92537 303 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 PBXIP1Q96AQ6 731 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 OSMRQ99650 979 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 ZMYND12Q9H0C1 365 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 HCSTQ9UBK5 93 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 LZTS1Q9Y250 596 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 PCDHA10Q9Y5I2 948 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 WDR81Q562E7 1941 aa16.94■□□□□ 0.3
CAPN1-219ENST00000530495 KLF18A0A0U1RQI7 1052 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 ESYT2A0FGR8 921 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 ADAMTS3O15072 1205 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 VTNP04004 478 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 FGFR1P11362 822 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 LAG3P18627 525 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 ADD1P35611 737 aaKnown RBP16.93■□□□□ 0.3
CAPN1-219ENST00000530495 PLCB3Q01970 1234 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 BMP2KLQ5H9B9 411 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 METTL13Q8N6R0 699 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 RASGRP4Q8TDF6 673 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 PPP1R16BQ96T49 567 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 CEP131Q9UPN4 1083 aa16.93■□□□□ 0.3
CAPN1-219ENST00000530495 CCDC196A0A1B0GTZ2 297 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 MAGEB2O15479 319 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 PSAPP07602 524 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 HMGB1P09429 215 aaKnown RBP16.92■□□□□ 0.3
CAPN1-219ENST00000530495 SETQ01105 290 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-219ENST00000530495 KRT32Q14532 448 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 LRRC55Q6ZSA7 311 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 ZNF710Q8N1W2 664 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 MRPS27Q92552 414 aaKnown RBP16.92■□□□□ 0.3
CAPN1-219ENST00000530495 RPGRIP1Q96KN7 1286 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 CASD1Q96PB1 797 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 TMEM117Q9H0C3 514 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 S1PR5Q9H228 398 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 C6orf50Q9HD87 102 aa16.92■□□□□ 0.3
CAPN1-219ENST00000530495 PUF60Q9UHX1 559 aaKnown RBP16.92■□□□□ 0.3
CAPN1-219ENST00000530495 HOXA2O43364 376 aa16.91■□□□□ 0.3
CAPN1-219ENST00000530495 CIITAP33076 1130 aa16.91■□□□□ 0.3
CAPN1-219ENST00000530495 NLRP11P59045 1033 aaKnown RBP16.91■□□□□ 0.3
CAPN1-219ENST00000530495 IER5LQ5T953 404 aa16.91■□□□□ 0.3
CAPN1-219ENST00000530495 EFCAB12Q6NXP0 572 aa16.91■□□□□ 0.3
CAPN1-219ENST00000530495 TRMT1LQ7Z2T5 733 aaKnown RBP16.91■□□□□ 0.3
CAPN1-219ENST00000530495 LINC01465Q8N7H1 131 aa16.91■□□□□ 0.3
CAPN1-219ENST00000530495 PRRX2Q99811 253 aa16.91■□□□□ 0.3
CAPN1-219ENST00000530495 ADAMTS10Q9H324 1103 aa16.91■□□□□ 0.3
CAPN1-219ENST00000530495 RNF19AQ9NV58 838 aa16.91■□□□□ 0.3
CAPN1-219ENST00000530495 GABBR1Q9UBS5 961 aa16.91■□□□□ 0.3
CAPN1-219ENST00000530495 SRGAP2BP0DMP2 458 aa16.9■□□□□ 0.3
CAPN1-219ENST00000530495 EIF4BP23588 611 aaKnown RBP16.9■□□□□ 0.3
CAPN1-219ENST00000530495 CLCN3P51790 818 aa16.9■□□□□ 0.3
CAPN1-219ENST00000530495 SIGLEC14Q08ET2 396 aa16.9■□□□□ 0.3
CAPN1-219ENST00000530495 PRR16Q569H4 304 aa16.9■□□□□ 0.3
CAPN1-219ENST00000530495 ANKRD54Q6NXT1 300 aa16.9■□□□□ 0.3
CAPN1-219ENST00000530495 KCNT2Q6UVM3 1135 aa16.9■□□□□ 0.3
CAPN1-219ENST00000530495 REXO1Q8N1G1 1221 aaKnown RBP16.9■□□□□ 0.3
CAPN1-219ENST00000530495 FBXL6Q8N531 539 aa16.9■□□□□ 0.3
CAPN1-219ENST00000530495 PRSS33Q8NF86 280 aa16.9■□□□□ 0.3
CAPN1-219ENST00000530495 CCDC12Q8WUD4 166 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-219ENST00000530495 FAM167AQ96KS9 214 aa16.9■□□□□ 0.3
CAPN1-219ENST00000530495 NGRNQ9NPE2 291 aaKnown RBP16.9■□□□□ 0.3
CAPN1-219ENST00000530495 PRPF3O43395 683 aaKnown RBP16.89■□□□□ 0.29
CAPN1-219ENST00000530495 ZSCAN20P17040 1043 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-219ENST00000530495 TMOD1P28289 359 aa16.89■□□□□ 0.29
CAPN1-219ENST00000530495 GNA11P29992 359 aa16.89■□□□□ 0.29
CAPN1-219ENST00000530495 TECP42680 631 aa16.89■□□□□ 0.29
CAPN1-219ENST00000530495 METAP2P50579 478 aaKnown RBP eCLIP16.89■□□□□ 0.293e-8■■□□□ 13.7
CAPN1-219ENST00000530495 KRT17Q04695 432 aa16.89■□□□□ 0.29
CAPN1-219ENST00000530495 APOBRQ0VD83 1088 aa16.89■□□□□ 0.29
CAPN1-219ENST00000530495 PLPP4Q5VZY2 271 aa16.89■□□□□ 0.29
CAPN1-219ENST00000530495 SYCE2Q6PIF2 218 aa16.89■□□□□ 0.29
CAPN1-219ENST00000530495 ECHDC2Q86YB7 292 aa16.89■□□□□ 0.29
CAPN1-219ENST00000530495 SUGP1Q8IWZ8 645 aaKnown RBP16.89■□□□□ 0.29
CAPN1-219ENST00000530495 LENG9Q96B70 501 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms