RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 TTI1O43156 1089 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 PLA2G4BP0C869 781 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 IFFO1Q0D2I5 559 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 RPS6KA1Q15418 735 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 GPATCH4Q5T3I0 446 aaKnown RBP15.44■□□□□ 0.06
USP48-213ENST00000529637 TMC3Q7Z5M5 1100 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 EIF4E1BA6NMX2 242 aaKnown RBP15.44■□□□□ 0.06
USP48-213ENST00000529637 EDIL3O43854 480 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 SHBGP04278 402 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 SHMT1P34896 483 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 PRR16Q569H4 304 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 ERMARDQ5T6L9 678 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 AGAP11Q8TF27 550 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 TEKT1Q969V4 418 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 DBNDD1Q9H9R9 158 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 EBF2Q9HAK2 575 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 KIF9Q9HAQ2 790 aa15.44■□□□□ 0.06
USP48-213ENST00000529637 POTEFA5A3E0 1075 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 UPP2O95045 317 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 SERPING1P05155 500 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 POTEIP0CG38 1075 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 GABPAQ06546 454 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 CUL1Q13616 776 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 SLC18A3Q16572 532 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 UBAP2Q5T6F2 1119 aaKnown RBP15.43■□□□□ 0.06
USP48-213ENST00000529637 CDC42EP5Q6NZY7 148 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 POTEGQ6S5H5 508 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 POTEEQ6S8J3 1075 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 ZFPM1Q8IX07 1006 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 CCDC63Q8NA47 563 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 PRCCQ92733 491 aaPredicted RBP15.43■□□□□ 0.06
USP48-213ENST00000529637 RSRC1Q96IZ7 334 aaKnown RBP15.43■□□□□ 0.06
USP48-213ENST00000529637 ZNF317Q96PQ6 595 aaPredicted RBP15.43■□□□□ 0.06
USP48-213ENST00000529637 PSMD1Q99460 953 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 COA1Q9GZY4 146 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 ATP8A1Q9Y2Q0 1164 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 MYH1P12882 1939 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 CHN1P15882 459 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 ADRA2BP18089 450 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 GCKP35557 465 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 KCNJ2P63252 427 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 AGBL2Q5U5Z8 902 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 BZW1Q7L1Q6 419 aaKnown RBP15.43■□□□□ 0.06
USP48-213ENST00000529637 MAB21L3Q8N8X9 362 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 CCDC197Q8NCU1 140 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 CERKQ8TCT0 537 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 LMBR1Q8WVP7 490 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 TAF4BQ92750 862 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 IQCDQ96DY2 449 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 NT5C3AQ9H0P0 336 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP48-213ENST00000529637 ATP6V0A2Q9Y487 856 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 SMIM23A6NLE4 172 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 F8VZ95 297 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 KIF4AO95239 1232 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 GRIK3Q13003 919 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 PSMD2Q13200 908 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 PABPC4Q13310 644 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP48-213ENST00000529637 TCERG1LQ5VWI1 586 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 SEPT12Q8IYM1 358 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 METTL13Q8N6R0 699 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 ZNF483Q8TF39 744 aaPredicted RBP15.43■□□□□ 0.06
USP48-213ENST00000529637 ZNF570Q96NI8 536 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 SWAP70Q9UH65 585 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 NR2E1Q9Y466 385 aa15.43■□□□□ 0.06
USP48-213ENST00000529637 GHRP10912 638 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 TAL1P17542 331 aaPredicted RBP15.42■□□□□ 0.06
USP48-213ENST00000529637 ADAM9Q13443 819 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 TMEM119Q4V9L6 283 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 LRRC34Q8IZ02 419 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 DNAJC19Q96DA6 116 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 TRIM51Q9BSJ1 452 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 ABCF3Q9NUQ8 709 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 SLC12A4Q9UP95 1085 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 C15orf41Q9Y2V0 281 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 NOC2LQ9Y3T9 749 aaKnown RBP15.42■□□□□ 0.06
USP48-213ENST00000529637 DDX60LQ5H9U9 1706 aaKnown RBP15.42■□□□□ 0.06
USP48-213ENST00000529637 A8MUI8 341 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 CYP4A11Q02928 519 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 BIRC2Q13490 618 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 NBPF9Q3BBW0 867 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 SLFN13Q68D06 897 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 ELAC2Q9BQ52 826 aaKnown RBP15.42■□□□□ 0.06
USP48-213ENST00000529637 ANO3Q9BYT9 981 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 FAM129AQ9BZQ8 928 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 EMILIN3Q9NT22 766 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 PCDHAC2Q9Y5I4 1007 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 KDM3AQ9Y4C1 1321 aa15.42■□□□□ 0.06
USP48-213ENST00000529637 KRIT1O00522 736 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 SNHG28P0DPA3 235 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 EEF2P13639 858 aaKnown RBP15.41■□□□□ 0.06
USP48-213ENST00000529637 COPB2P35606 906 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 HOOK2Q96ED9 719 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 GJD4Q96KN9 370 aaPredicted RBP15.41■□□□□ 0.06
USP48-213ENST00000529637 SELENOSQ9BQE4 189 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 MYH4Q9Y623 1939 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 GDF11O95390 407 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 MMEP08473 750 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 ZBTB48P10074 688 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms