RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 RPUSD2Q8IZ73 545 aaKnown RBP6.5□□□□□ -1.37
CTR9-204ENST00000529355 ZNF610Q8N9Z0 462 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 MARCH10Q8NA82 808 aaPredicted RBP6.5□□□□□ -1.37
CTR9-204ENST00000529355 MBD6Q96DN6 1003 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 FOXB1Q99853 325 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 CCDC8Q9H0W5 538 aaPredicted RBP6.5□□□□□ -1.37
CTR9-204ENST00000529355 EDARQ9UNE0 448 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 H0Y858 1186 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 NOBOXO60393 691 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 ZNF888P0CJ79 500 aaPredicted RBP6.49□□□□□ -1.37
CTR9-204ENST00000529355 LSP1P33241 339 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 PHC1P78364 1004 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 OCRLQ01968 901 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 NT5DC1Q5TFE4 455 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 LARP4Q71RC2 724 aaKnown RBP eCLIP6.49□□□□□ -1.37
CTR9-204ENST00000529355 PASD1Q8IV76 773 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 ZDHHC5Q9C0B5 715 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 JAG2Q9Y219 1238 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 APOBEC2Q9Y235 224 aaKnown RBP6.49□□□□□ -1.37
CTR9-204ENST00000529355 ZDHHC9Q9Y397 364 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 DUSP10Q9Y6W6 482 aa6.49□□□□□ -1.37
CTR9-204ENST00000529355 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.48□□□□□ -1.37
CTR9-204ENST00000529355 PRSS38A1L453 326 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 KDM1AO60341 852 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 BRINP1O60477 761 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 KATNA1O75449 491 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 CYP1A1P04798 512 aaPredicted RBP6.48□□□□□ -1.37
CTR9-204ENST00000529355 CD40P25942 277 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 KCNC1P48547 511 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 STAT5BP51692 787 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 KCNQ1P51787 676 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 CT83Q5H943 113 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 IQSEC1Q6DN90 963 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 KANSL1Q7Z3B3 1105 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 ZSCAN18Q8TBC5 510 aaPredicted RBP6.48□□□□□ -1.37
CTR9-204ENST00000529355 KCNC2Q96PR1 638 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 TMEM168Q9H0V1 697 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 NOC2LQ9Y3T9 749 aaKnown RBP6.48□□□□□ -1.37
CTR9-204ENST00000529355 PPP2R3BQ9Y5P8 575 aa6.48□□□□□ -1.37
CTR9-204ENST00000529355 OTOL1A6NHN0 477 aaPredicted RBP6.47□□□□□ -1.37
CTR9-204ENST00000529355 CELA3BP08861 270 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 APEX1P27695 318 aaKnown RBP6.47□□□□□ -1.37
CTR9-204ENST00000529355 SCAND1P57086 179 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 ROM1Q03395 351 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 ADCY2Q08462 1091 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 TOP3AQ13472 1001 aaPredicted RBP6.47□□□□□ -1.37
CTR9-204ENST00000529355 ACAP1Q15027 740 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 GPR158Q5T848 1215 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 Q6ZUG5 572 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 RASSF3Q86WH2 238 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 CXorf67Q86X51 503 aaPredicted RBP6.47□□□□□ -1.37
CTR9-204ENST00000529355 PHYKPLQ8IUZ5 450 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 LYSMD2Q8IV50 215 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 C7orf31Q8N865 590 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 TGFBRAP1Q8WUH2 860 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 WRNIP1Q96S55 665 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 ADAM7Q9H2U9 754 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 FTSJ1Q9UET6 329 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 TMPRSS11EQ9UL52 423 aa6.47□□□□□ -1.37
CTR9-204ENST00000529355 PCDH8O95206 1070 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 LPLP06858 475 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 CSF2RBP32927 897 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 RRADP55042 308 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 ADCY1Q08828 1119 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 NFATC3Q12968 1075 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 DPP8Q6V1X1 898 aaPredicted RBP6.46□□□□□ -1.38
CTR9-204ENST00000529355 OTOP2Q7RTS6 562 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 SPATS2Q86XZ4 545 aaKnown RBP6.46□□□□□ -1.38
CTR9-204ENST00000529355 ZZZ3Q8IYH5 903 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 CNTD1Q8N815 330 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 CALML6Q8TD86 181 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 KIAA1683Q9H0B3 1180 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 XYLT2Q9H1B5 865 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 C14orf119Q9NWQ9 140 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 SLC5A4Q9NY91 659 aa6.46□□□□□ -1.38
CTR9-204ENST00000529355 MROH6A6NGR9 719 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 B4GALT3O60512 393 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 RAB11FIP3O75154 756 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 CYP7B1O75881 506 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 CANXP27824 592 aaKnown RBP6.45□□□□□ -1.38
CTR9-204ENST00000529355 POLD1P28340 1107 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 GUCY2FP51841 1108 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 MANFP55145 182 aaKnown RBP6.45□□□□□ -1.38
CTR9-204ENST00000529355 ERVK-21P61565 698 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 MTMR1Q13613 665 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 TRIM25Q14258 630 aaKnown RBP6.45□□□□□ -1.38
CTR9-204ENST00000529355 TBR1Q16650 682 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 RNF219Q5W0B1 726 aaPredicted RBP6.45□□□□□ -1.38
CTR9-204ENST00000529355 TMEM200BQ69YZ2 307 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 GRAMD4Q6IC98 578 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 KIAA1841Q6NSI8 718 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 CCDC62Q6P9F0 684 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 FRMD7Q6ZUT3 714 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 NME9Q86XW9 330 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 EAF2Q96CJ1 260 aaPredicted RBP6.45□□□□□ -1.38
CTR9-204ENST00000529355 PTPN18Q99952 460 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 KATNBL1Q9H079 304 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 MTG2Q9H4K7 406 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 LUC7LQ9NQ29 371 aaKnown RBP6.45□□□□□ -1.38
CTR9-204ENST00000529355 RAPGEFL1Q9UHV5 662 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms