RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 DHX8Q14562 1220 aaKnown RBP24.46■■□□□ 1.51
PACSIN3-205ENST00000528462 MARCH8Q5T0T0 291 aa24.46■■□□□ 1.51
PACSIN3-205ENST00000528462 MCPH1Q8NEM0 835 aa24.46■■□□□ 1.51
PACSIN3-205ENST00000528462 LMBR1Q8WVP7 490 aa24.46■■□□□ 1.51
PACSIN3-205ENST00000528462 DDX12PQ92771 950 aa24.46■■□□□ 1.51
PACSIN3-205ENST00000528462 NUP62CLQ9H1M0 184 aa24.46■■□□□ 1.51
PACSIN3-205ENST00000528462 STARD7Q9NQZ5 370 aa24.46■■□□□ 1.51
PACSIN3-205ENST00000528462 SETD4Q9NVD3 440 aa24.46■■□□□ 1.51
PACSIN3-205ENST00000528462 HDAC6Q9UBN7 1215 aa24.46■■□□□ 1.51
PACSIN3-205ENST00000528462 GTF2IRD1Q9UHL9 959 aa24.46■■□□□ 1.51
PACSIN3-205ENST00000528462 C22orf31O95567 290 aa24.45■■□□□ 1.5
PACSIN3-205ENST00000528462 POLGP54098 1239 aaPredicted RBP24.45■■□□□ 1.5
PACSIN3-205ENST00000528462 SPATA20Q8TB22 786 aa24.45■■□□□ 1.5
PACSIN3-205ENST00000528462 STAMQ92783 540 aa24.45■■□□□ 1.5
PACSIN3-205ENST00000528462 DNAJC19Q96DA6 116 aa24.45■■□□□ 1.5
PACSIN3-205ENST00000528462 ATP6V0A4Q9HBG4 840 aa24.45■■□□□ 1.5
PACSIN3-205ENST00000528462 ODF2LQ9ULJ1 636 aa24.45■■□□□ 1.5
PACSIN3-205ENST00000528462 ARID2Q68CP9 1835 aa24.44■■□□□ 1.5
PACSIN3-205ENST00000528462 A0A0U1RQG5 324 aaPredicted RBP24.44■■□□□ 1.5
PACSIN3-205ENST00000528462 USO1O60763 962 aaKnown RBP24.44■■□□□ 1.5
PACSIN3-205ENST00000528462 COL6A1P12109 1028 aa24.44■■□□□ 1.5
PACSIN3-205ENST00000528462 DPYDQ12882 1025 aa24.44■■□□□ 1.5
PACSIN3-205ENST00000528462 GRAMD1CQ8IYS0 662 aa24.44■■□□□ 1.5
PACSIN3-205ENST00000528462 SYAP1Q96A49 352 aaPredicted RBP24.44■■□□□ 1.5
PACSIN3-205ENST00000528462 XPNPEP1Q9NQW7 623 aa24.44■■□□□ 1.5
PACSIN3-205ENST00000528462 KAT6AQ92794 2004 aa24.44■■□□□ 1.5
PACSIN3-205ENST00000528462 C17orf102A2RUQ5 167 aa24.43■■□□□ 1.5
PACSIN3-205ENST00000528462 KLRC1P26715 233 aa24.43■■□□□ 1.5
PACSIN3-205ENST00000528462 GIT2Q14161 759 aa24.43■■□□□ 1.5
PACSIN3-205ENST00000528462 EMC2Q15006 297 aa24.43■■□□□ 1.5
PACSIN3-205ENST00000528462 CCDC183Q5T5S1 534 aa24.43■■□□□ 1.5
PACSIN3-205ENST00000528462 MTHFD1LQ6UB35 978 aa24.43■■□□□ 1.5
PACSIN3-205ENST00000528462 TRAPPC12Q8WVT3 735 aa24.43■■□□□ 1.5
PACSIN3-205ENST00000528462 VTI1AQ96AJ9 217 aa24.43■■□□□ 1.5
PACSIN3-205ENST00000528462 TUBE1Q9UJT0 475 aa24.43■■□□□ 1.5
PACSIN3-205ENST00000528462 FRMD3A2A2Y4 597 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 CHMP4BP1P59074 171 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 CUL4BQ13620 913 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 RBM43Q6ZSC3 357 aaKnown RBP24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 LINC01465Q8N7H1 131 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 RETREG2Q8NC44 543 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 REEP2Q9BRK0 252 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 TMEM63CQ9P1W3 806 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 PVALEFA0A1B0GWK0 134 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 CDK7P50613 346 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 ZNF131P52739 623 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 RTP1P59025 263 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 IGBP1P78318 339 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 PNOCQ13519 176 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 HIC1Q14526 733 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 CAMK4Q16566 473 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 NT5DC1Q5TFE4 455 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 KIFAP3Q92845 792 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 C17orf75Q9HAS0 396 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 PCDHA2Q9Y5H9 948 aa24.42■■□□□ 1.5
PACSIN3-205ENST00000528462 ARVCFO00192 962 aa24.41■■□□□ 1.5
PACSIN3-205ENST00000528462 PRR29P0C7W0 189 aa24.41■■□□□ 1.5
PACSIN3-205ENST00000528462 MAPK7Q13164 816 aa24.41■■□□□ 1.5
PACSIN3-205ENST00000528462 COL13A1Q5TAT6 717 aaPredicted RBP24.41■■□□□ 1.5
PACSIN3-205ENST00000528462 C1orf53Q5VUE5 145 aa24.41■■□□□ 1.5
PACSIN3-205ENST00000528462 CAVIN1Q6NZI2 390 aaKnown RBP24.41■■□□□ 1.5
PACSIN3-205ENST00000528462 DAW1Q8N136 415 aa24.41■■□□□ 1.5
PACSIN3-205ENST00000528462 DRC1Q96MC2 740 aa24.41■■□□□ 1.5
PACSIN3-205ENST00000528462 GSDMAQ96QA5 445 aa24.41■■□□□ 1.5
PACSIN3-205ENST00000528462 BLZF1Q9H2G9 400 aa24.41■■□□□ 1.5
PACSIN3-205ENST00000528462 SMC2O95347 1197 aa24.4■■□□□ 1.5
PACSIN3-205ENST00000528462 KRT18P05783 430 aaKnown RBP24.4■■□□□ 1.5
PACSIN3-205ENST00000528462 SARSP49591 514 aaKnown RBP24.4■■□□□ 1.5
PACSIN3-205ENST00000528462 IER5Q5VY09 327 aa24.4■■□□□ 1.5
PACSIN3-205ENST00000528462 GDF6Q6KF10 455 aaPredicted RBP24.4■■□□□ 1.5
PACSIN3-205ENST00000528462 UNC13DQ70J99 1090 aa24.4■■□□□ 1.5
PACSIN3-205ENST00000528462 DYMQ7RTS9 669 aa24.4■■□□□ 1.5
PACSIN3-205ENST00000528462 TCP11Q8WWU5 503 aa24.4■■□□□ 1.5
PACSIN3-205ENST00000528462 KIAA1468Q9P260 1216 aa24.4■■□□□ 1.5
PACSIN3-205ENST00000528462 NPHP3-ACAD11A0A0J9YXS1 232 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 SMIM35A0A1B0GVV1 85 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 HIP1RO75146 1068 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 TMOD1P28289 359 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 CASP1P29466 404 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 ARL2P36404 184 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 DNM2P50570 870 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 ASIC1P78348 528 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 FAM47CQ5HY64 1035 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 EFCAB12Q6NXP0 572 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 TAF2Q6P1X5 1199 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 PCDHA5Q9Y5H7 936 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 COL4A3BPQ9Y5P4 624 aa24.39■■□□□ 1.5
PACSIN3-205ENST00000528462 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 TREHO43280 583 aa24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 KLRC4O43908 158 aa24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 RPLP2P05387 115 aaKnown RBP24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 EHHADHQ08426 723 aa24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 RAD51AP2Q09MP3 1159 aa24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 MKRN4PQ13434 485 aaPredicted RBP24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 KCNB1Q14721 858 aa24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 SNX17Q15036 470 aa24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 CCDC65Q8IXS2 484 aa24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 PPP1R13LQ8WUF5 828 aa24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 SENP6Q9GZR1 1112 aaPredicted RBP24.38■■□□□ 1.49
PACSIN3-205ENST00000528462 PARVGQ9HBI0 331 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms