RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 HCSTQ9UBK5 93 aa21.28■■□□□ 1
CAPN1-206ENST00000526966 FSD2A1L4K1 749 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 FSCN2O14926 492 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 PPFIA3O75145 1194 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 GPR32O75388 356 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 IBSPP21815 317 aaPredicted RBP21.27■■□□□ 1
CAPN1-206ENST00000526966 FAM189BP81408 668 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 KRT32Q14532 448 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 DSC3Q14574 896 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 SPOUT1Q5T280 376 aaKnown RBP21.27■■□□□ 1
CAPN1-206ENST00000526966 MCTP2Q6DN12 878 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 SMAP1Q8IYB5 467 aaPredicted RBP21.27■■□□□ 1
CAPN1-206ENST00000526966 COLGALT1Q8NBJ5 622 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 VN1R2Q8NFZ6 395 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 CDCA3Q99618 268 aaPredicted RBP21.27■■□□□ 1
CAPN1-206ENST00000526966 ZNF577Q9BSK1 485 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 CWH43Q9H720 699 aa21.27■■□□□ 1
CAPN1-206ENST00000526966 TYW1Q9NV66 732 aaKnown RBP21.27■■□□□ 1
CAPN1-206ENST00000526966 KMT2EQ8IZD2 1858 aa21.26■□□□□ 0.99
CAPN1-206ENST00000526966 NID2Q14112 1375 aa21.26■□□□□ 0.99
CAPN1-206ENST00000526966 ADAMTS3O15072 1205 aa21.26■□□□□ 0.99
CAPN1-206ENST00000526966 ADD1P35611 737 aaKnown RBP21.26■□□□□ 0.99
CAPN1-206ENST00000526966 MRE11P49959 708 aa21.26■□□□□ 0.99
CAPN1-206ENST00000526966 ERVFC1P60507 584 aa21.26■□□□□ 0.99
CAPN1-206ENST00000526966 DUSP6Q16828 381 aa21.26■□□□□ 0.99
CAPN1-206ENST00000526966 PDE12Q6L8Q7 609 aaKnown RBP21.26■□□□□ 0.99
CAPN1-206ENST00000526966 SUSD6Q92537 303 aa21.26■□□□□ 0.99
CAPN1-206ENST00000526966 PPP1R16BQ96T49 567 aa21.26■□□□□ 0.99
CAPN1-206ENST00000526966 PHF7Q9BWX1 381 aaPredicted RBP21.26■□□□□ 0.99
CAPN1-206ENST00000526966 PER2O15055 1255 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 VTNP04004 478 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 FGFR1P11362 822 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 ATF7P17544 494 aaPredicted RBP21.25■□□□□ 0.99
CAPN1-206ENST00000526966 LAG3P18627 525 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 KCNC3Q14003 757 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 TRIM67Q6ZTA4 783 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 CKAP2LQ8IYA6 745 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 THNSL1Q8IYQ7 743 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 REXO1Q8N1G1 1221 aaKnown RBP21.25■□□□□ 0.99
CAPN1-206ENST00000526966 LINC01465Q8N7H1 131 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 MICAL1Q8TDZ2 1067 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 ATP6V0A4Q9HBG4 840 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 CEP131Q9UPN4 1083 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 LZTS1Q9Y250 596 aa21.25■□□□□ 0.99
CAPN1-206ENST00000526966 PSAPP07602 524 aa21.24■□□□□ 0.99
CAPN1-206ENST00000526966 HMGB1P09429 215 aaKnown RBP21.24■□□□□ 0.99
CAPN1-206ENST00000526966 CIITAP33076 1130 aa21.24■□□□□ 0.99
CAPN1-206ENST00000526966 METAP2P50579 478 aaKnown RBP eCLIP21.24■□□□□ 0.993e-8■■■■■ 34.2
CAPN1-206ENST00000526966 RBM10P98175 930 aaKnown RBP21.24■□□□□ 0.99
CAPN1-206ENST00000526966 PLCB3Q01970 1234 aa21.24■□□□□ 0.99
CAPN1-206ENST00000526966 PKN1Q16512 942 aa21.24■□□□□ 0.99
CAPN1-206ENST00000526966 TMEM184AQ6ZMB5 413 aa21.24■□□□□ 0.99
CAPN1-206ENST00000526966 TMEM117Q9H0C3 514 aa21.24■□□□□ 0.99
CAPN1-206ENST00000526966 C6orf50Q9HD87 102 aa21.24■□□□□ 0.99
CAPN1-206ENST00000526966 RNF19AQ9NV58 838 aa21.24■□□□□ 0.99
CAPN1-206ENST00000526966 PCDHA10Q9Y5I2 948 aa21.24■□□□□ 0.99
CAPN1-206ENST00000526966 CACNA1HO95180 2353 aa21.24■□□□□ 0.99
CAPN1-206ENST00000526966 CCDC196A0A1B0GTZ2 297 aa21.23■□□□□ 0.99
CAPN1-206ENST00000526966 MAGEB2O15479 319 aa21.23■□□□□ 0.99
CAPN1-206ENST00000526966 CLCN3P51790 818 aa21.23■□□□□ 0.99
CAPN1-206ENST00000526966 ZXDAP98168 799 aa21.23■□□□□ 0.99
CAPN1-206ENST00000526966 METTL13Q8N6R0 699 aa21.23■□□□□ 0.99
CAPN1-206ENST00000526966 RASGRP4Q8TDF6 673 aa21.23■□□□□ 0.99
CAPN1-206ENST00000526966 CCDC12Q8WUD4 166 aaPredicted RBP21.23■□□□□ 0.99
CAPN1-206ENST00000526966 MRPS27Q92552 414 aaKnown RBP21.23■□□□□ 0.99
CAPN1-206ENST00000526966 LENG9Q96B70 501 aa21.23■□□□□ 0.99
CAPN1-206ENST00000526966 FAM167AQ96KS9 214 aa21.23■□□□□ 0.99
CAPN1-206ENST00000526966 GABBR1Q9UBS5 961 aa21.23■□□□□ 0.99
CAPN1-206ENST00000526966 TMEM221A6NGB7 291 aa21.22■□□□□ 0.99
CAPN1-206ENST00000526966 M0R296 226 aa21.22■□□□□ 0.99
CAPN1-206ENST00000526966 HOXA2O43364 376 aa21.22■□□□□ 0.99
CAPN1-206ENST00000526966 PRR16Q569H4 304 aa21.22■□□□□ 0.99
CAPN1-206ENST00000526966 LRRC55Q6ZSA7 311 aa21.22■□□□□ 0.99
CAPN1-206ENST00000526966 SKAP1Q86WV1 359 aa21.22■□□□□ 0.99
CAPN1-206ENST00000526966 CASD1Q96PB1 797 aa21.22■□□□□ 0.99
CAPN1-206ENST00000526966 ADAMTS10Q9H324 1103 aa21.22■□□□□ 0.99
CAPN1-206ENST00000526966 TCEAL9Q9UHQ7 104 aa21.22■□□□□ 0.99
CAPN1-206ENST00000526966 PRPF3O43395 683 aaKnown RBP21.21■□□□□ 0.99
CAPN1-206ENST00000526966 GNA11P29992 359 aa21.21■□□□□ 0.99
CAPN1-206ENST00000526966 NLRP11P59045 1033 aaKnown RBP21.21■□□□□ 0.99
CAPN1-206ENST00000526966 APOBRQ0VD83 1088 aa21.21■□□□□ 0.99
CAPN1-206ENST00000526966 TRMT1LQ7Z2T5 733 aaKnown RBP21.21■□□□□ 0.99
CAPN1-206ENST00000526966 ZNF710Q8N1W2 664 aa21.21■□□□□ 0.99
CAPN1-206ENST00000526966 LRRC43Q8N309 656 aa21.21■□□□□ 0.99
CAPN1-206ENST00000526966 KCNB2Q92953 911 aa21.21■□□□□ 0.99
CAPN1-206ENST00000526966 MAP7D2Q96T17 732 aa21.21■□□□□ 0.99
CAPN1-206ENST00000526966 NAP1L2Q9ULW6 460 aaPredicted RBP21.21■□□□□ 0.99
CAPN1-206ENST00000526966 WDR64B1ANS9 1081 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 ZNF862O60290 1169 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 CPA1P15085 419 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 PLPP4Q5VZY2 271 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 EFCAB12Q6NXP0 572 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 KCNT2Q6UVM3 1135 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 PRSS33Q8NF86 280 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 RPGRIP1Q96KN7 1286 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 TCF25Q9BQ70 676 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 S1PR5Q9H228 398 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 AKT3Q9Y243 479 aa21.2■□□□□ 0.98
CAPN1-206ENST00000526966 EDIL3O43854 480 aa21.19■□□□□ 0.98
CAPN1-206ENST00000526966 CDC45O75419 566 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms