RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	CCDC194	A0A1B0GVG4	234 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	PFDN1	O60925	122 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	PEX11A	O75192	247 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	TSPY3	P0CV98	308 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	TSPY8	P0CW00	308 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	TPBGL	P0DKB5	382 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	M6PR	P20645	277 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	GUCY2F	P51841	1108 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	EMP3	P54852	163 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	KIF23	Q02241	960 aa	Predicted RBP	4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SP4	Q02446	784 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	MCL1	Q07820	350 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	ITGA7	Q13683	1181 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	TTF1	Q15361	905 aa	Predicted RBP	4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	MEA1	Q16626	185 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SPRED3	Q2MJR0	410 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	CDKAL1	Q5VV42	579 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SLC2A7	Q6PXP3	512 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	LVRN	Q6Q4G3	990 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	ALLC	Q8N6M5	410 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	TSPYL6	Q8N831	410 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SPERT	Q8NA61	448 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SPATA20	Q8TB22	786 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SEC14L1	Q92503	715 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	WASF1	Q92558	559 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	MAML1	Q92585	1016 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	EME1	Q96AY2	570 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	CLMN	Q96JQ2	1002 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	UIMC1	Q96RL1	719 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZSWIM4	Q9H7M6	989 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	ECT2	Q9H8V3	914 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	PIH1D3	Q9NQM4	214 aa	Known RBP	4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	GPHN	Q9NQX3	736 aa	Predicted RBP	4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SEPT10	Q9P0V9	454 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	THEG	Q9P2T0	379 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	CRNN	Q9UBG3	495 aa	Predicted RBP	4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	LIMA1	Q9UHB6	759 aa	Known RBP	4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	GIT1	Q9Y2X7	761 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SQOR	Q9Y6N5	450 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288		E9PMD0	336 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	TJP3	O95049	919 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	UQCRFS1P1	P0C7P4	283 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZNF132	P52740	706 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	HAND2	P61296	217 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	TMEM62	Q0P6H9	643 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	FKBP15	Q5T1M5	1219 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	ADGRG6	Q86SQ4	1221 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	FSIP1	Q8NA03	581 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	TSEN2	Q8NCE0	465 aa	Known RBP	4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	CDKL2	Q92772	493 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	DPF2	Q92785	391 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	HAUS1	Q96CS2	278 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	RPS6KC1	Q96S38	1066 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SLC39A3	Q9BRY0	314 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	TUBB6	Q9BUF5	446 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	DHX36	Q9H2U1	1008 aa	Known RBP	4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	RABL2B	Q9UNT1	228 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SATB2	Q9UPW6	733 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SLC12A7	Q9Y666	1083 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	CSMD3	Q7Z407	3707 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	MYH7	P12883	1935 aa		4.16	□□□□□ -1.74
FAM49B-225	ENST00000523288	SOS2	Q07890	1332 aa	Predicted RBP	4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	STRCP1	A6NGW2	1772 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	LOC105371267	A0A1B0GV96	52 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288		A0A1W2PQC6	194 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	IQCA1L	A6NCM1	817 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	CHL1	O00533	1208 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	HGS	O14964	777 aa	Predicted RBP	4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	SERPINC1	P01008	464 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	MYZAP	P0CAP1	466 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZNF12	P17014	697 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	ENDOU	P21128	410 aa	Known RBP	4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	HOXA7	P31268	230 aa	Predicted RBP	4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	MMP13	P45452	471 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	PLCD1	P51178	756 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	CACNA2D1	P54289	1103 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	GUCY1A3	Q02108	690 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	TOB2	Q14106	344 aa	Predicted RBP	4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	MORC3	Q14149	939 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	QPCT	Q16769	361 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZNF423	Q2M1K9	1284 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	LIN52	Q52LA3	116 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	RESP18	Q5W5W9	173 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	SCUBE1	Q8IWY4	988 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	MINDY2	Q8NBR6	621 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	CHAC2	Q8WUX2	184 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	DYDC1	Q8WWB3	177 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	MAP4K1	Q92918	833 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	GSDMA	Q96QA5	445 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	TXLNGY	Q9BZA5	131 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	DPH5	Q9H2P9	285 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	UBAP1	Q9NZ09	502 aa		4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.15	□□□□□ -1.74
FAM49B-225	ENST00000523288		A0A1W2PQJ5	194 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	TMEM114	B3SHH9	223 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	PJA2	O43164	708 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	MAP3K13	O43283	966 aa		4.15	□□□□□ -1.75
FAM49B-225	ENST00000523288	TACC1	O75410	805 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms