RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 NUBP1P53384 320 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 SMC1AQ14683 1233 aaKnown RBP13.07□□□□□ -0.32
MRPS28-206ENST00000520946 KCNT2Q6UVM3 1135 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 TMTC3Q6ZXV5 915 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 PLA2G4DQ86XP0 818 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 UBALD2Q8IYN6 164 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 KIAA0319LQ8IZA0 1049 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 KREMEN2Q8NCW0 462 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 NECTIN4Q96NY8 510 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 ANO3Q9BYT9 981 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
MRPS28-206ENST00000520946 CDHR5Q9HBB8 845 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 RIC8AQ9NPQ8 531 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 RBM28Q9NW13 759 aaKnown RBP13.07□□□□□ -0.32
MRPS28-206ENST00000520946 SPG21Q9NZD8 308 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 NAP1L2Q9ULW6 460 aaPredicted RBP13.07□□□□□ -0.32
MRPS28-206ENST00000520946 CEP131Q9UPN4 1083 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 AKT3Q9Y243 479 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 ATG2AQ2TAZ0 1938 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 SMCO2A6NFE2 343 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 FSCN2O14926 492 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 VTNP04004 478 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 ALDH7A1P49419 539 aaKnown RBP13.06□□□□□ -0.32
MRPS28-206ENST00000520946 PLCB3Q01970 1234 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 ITIH3Q06033 890 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-206ENST00000520946 TMEM184AQ6ZMB5 413 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 LRRC43Q8N309 656 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 VN1R2Q8NFZ6 395 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-206ENST00000520946 ASIC4Q96FT7 647 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 LRRC2Q9BYS8 371 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 SORCS3Q9UPU3 1222 aa13.06□□□□□ -0.32
MRPS28-206ENST00000520946 MEIS1O00470 390 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 MAGEB2O15479 319 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 ATG7O95352 703 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 PSAPP07602 524 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 AP3B2Q13367 1082 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 WWC2Q6AWC2 1192 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 PPP1R18Q6NYC8 613 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 ABHD15Q6UXT9 468 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 FAM228AQ86W67 206 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 TEX2Q8IWB9 1127 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 RASGRP4Q8TDF6 673 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 TMEM40Q8WWA1 233 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 YTHDC1Q96MU7 727 aaKnown RBP13.05□□□□□ -0.32
MRPS28-206ENST00000520946 ZNF577Q9BSK1 485 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 S1PR5Q9H228 398 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 CWH43Q9H720 699 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 HCSTQ9UBK5 93 aa13.05□□□□□ -0.32
MRPS28-206ENST00000520946 DBR1Q9UK59 544 aaKnown RBP13.05□□□□□ -0.32
MRPS28-206ENST00000520946 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
MRPS28-206ENST00000520946 KIAA1671Q9BY89 1806 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 LOXHD1Q8IVV2 1947 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 HIDE1A8MVS5 230 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 hCG_1984214I3L0E3 225 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 IPO5O00410 1097 aaKnown RBP13.04□□□□□ -0.32
MRPS28-206ENST00000520946 GALR2O43603 387 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-206ENST00000520946 CXCL14O95715 111 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 CCNE2O96020 404 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 MTHFRP42898 656 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 NLRP11P59045 1033 aaKnown RBP13.04□□□□□ -0.32
MRPS28-206ENST00000520946 FGD1P98174 961 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 FOXK2Q01167 660 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 RTN1Q16799 776 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 ATAT1Q5SQI0 421 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 RNF20Q5VTR2 975 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 JAKMIP3Q5VZ66 844 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 EFCAB12Q6NXP0 572 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 SYCE2Q6PIF2 218 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 NIPA1Q7RTP0 329 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 CCDC60Q8IWA6 550 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-206ENST00000520946 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 ZNF713Q8N859 430 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-206ENST00000520946 TDRD5Q8NAT2 981 aaKnown RBP13.04□□□□□ -0.32
MRPS28-206ENST00000520946 TMEM169Q96HH4 297 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 ADAM7Q9H2U9 754 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 NRBP2Q9NSY0 501 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 TBC1D22BQ9NU19 505 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 PLXNA4Q9HCM2 1894 aa13.04□□□□□ -0.32
MRPS28-206ENST00000520946 IGKV6D-21A0A0A0MT36 114 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 SLC27A2O14975 620 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 ZBTB43O43298 467 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
MRPS28-206ENST00000520946 SREBF1P36956 1147 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 PBX3P40426 434 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 METAP2P50579 478 aaKnown RBP eCLIP13.03□□□□□ -0.32
MRPS28-206ENST00000520946 FAM189BP81408 668 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 RARS2Q5T160 578 aaKnown RBP13.03□□□□□ -0.32
MRPS28-206ENST00000520946 SMAP1Q8IYB5 467 aaPredicted RBP13.03□□□□□ -0.32
MRPS28-206ENST00000520946 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 MRPL43Q8N983 215 aaKnown RBP13.03□□□□□ -0.32
MRPS28-206ENST00000520946 FAM167AQ96KS9 214 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 CASD1Q96PB1 797 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 MRPL9Q9BYD2 267 aaKnown RBP13.03□□□□□ -0.32
MRPS28-206ENST00000520946 ANO2Q9NQ90 1003 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 DACT1Q9NYF0 836 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 GABBR1Q9UBS5 961 aa13.03□□□□□ -0.32
MRPS28-206ENST00000520946 PCDHA10Q9Y5I2 948 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms