RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 GTF2A2P52657 109 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ATP11AP98196 1134 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 NFKB2Q00653 900 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 MLLT1Q03111 559 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 LMNB2Q03252 620 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 PPATQ06203 517 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 PDE4BQ07343 736 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 PPARAQ07869 468 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 SREBF2Q12772 1141 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 SPP2Q13103 211 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 SNAPC2Q13487 334 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 CAMK2GQ13555 558 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 SEPT6Q14141 434 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 RRP1BQ14684 758 aaKnown RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 SHROOM1Q2M3G4 852 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 RRP12Q5JTH9 1297 aaKnown RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 FAM83BQ5T0W9 1011 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 L1TD1Q5T7N2 865 aaKnown RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 C12orf60Q5U649 245 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 IL31Q6EBC2 164 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 OTUD7BQ6GQQ9 843 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 CCDC174Q6PII3 467 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 GADL1Q6ZQY3 521 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 HFE2Q6ZVN8 426 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 CCDC84Q86UT8 332 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 ERO1BQ86YB8 467 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 SLC44A5Q8NCS7 719 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 POP1Q99575 1024 aaKnown RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 PLVAPQ9BX97 442 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 PBX4Q9BYU1 374 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ASPSCR1Q9BZE9 553 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 LRRC27Q9C0I9 530 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 CCDC113Q9H0I3 377 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ZNF700Q9H0M5 742 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 MUC3BQ9H195 1237 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 RASSF4Q9H2L5 321 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ZNF576Q9H609 170 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ZNF287Q9HBT7 754 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 EPB41L4AQ9HCS5 686 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 UBP1Q9NZI7 540 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 PRKAG3Q9UGI9 489 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 CTNNA3Q9UI47 895 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 ATXN7L1Q9ULK2 861 aaPredicted RBP3.2□□□□□ -1.9
SKP1-204ENST00000517691 SSC5DA1L4H1 1573 aa3.2□□□□□ -1.9
SKP1-204ENST00000517691 PSME4Q14997 1843 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 CCL15-CCL14A0A0B4J2E2 113 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 CCDC163A0A0D9SF12 145 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 RANBP6O60518 1105 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 RASGRP1O95267 797 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 TBC1D8O95759 1140 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 ASNSP08243 561 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 SHMT1P34896 483 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 GUCY2FP51841 1108 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 INHBEP58166 350 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 HAND2P61296 217 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 FAM193AP78312 1265 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 GPLD1P80108 840 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 PPIL2Q13356 520 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 SEPT2Q15019 361 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 ZYXQ15942 572 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 CCL15Q16663 113 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 SBK1Q52WX2 424 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 BMP2KLQ5H9B9 411 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 RPS26P11Q5JNZ5 115 aaPredicted RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 FAM47AQ5JRC9 791 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 NOL9Q5SY16 702 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 TATDN1Q6P1N9 297 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 MICALL1Q8N3F8 863 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 FAM169BQ8N8A8 192 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 GOLM1Q8NBJ4 401 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 SMAD5Q99717 465 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 CEP44Q9C0F1 390 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 DNAJC18Q9H819 358 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 ZFYVE1Q9HBF4 777 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 INCENPQ9NQS7 918 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 RNF186Q9NXI6 227 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 TMOD4Q9NZQ9 345 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 LUZP4Q9P127 313 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 PFDN2Q9UHV9 154 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 PHF24Q9UPV7 400 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 R3HCC1Q9Y3T6 440 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 AFG3L2Q9Y4W6 797 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 A0A087X0B3 334 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 TSPY2A6NKD2 308 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 PDHXO00330 501 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 CXCL11O14625 94 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 PDPK1O15530 556 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 SGSM2O43147 1006 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 DHX16O60231 1041 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 PIP5K1CO60331 668 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 RNASEH2AO75792 299 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 MYL3P08590 195 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 TSPY3P0CV98 308 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 TSPY8P0CW00 308 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 HSPA1AP0DMV8 641 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 HSPA1BP0DMV9 641 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 AKR1B1P15121 316 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 BMP6P22004 513 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 FGFR3P22607 806 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 STAT3P40763 770 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms