RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 PBX3P40426 434 aa17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 CRYBB1P53674 252 aaPredicted RBP17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 CBX2Q14781 532 aaPredicted RBP17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 BMP8AQ7Z5Y6 402 aa17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 ABI1Q8IZP0 508 aa17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 CDCA3Q99618 268 aaPredicted RBP17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 TCF25Q9BQ70 676 aa17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 ZNF577Q9BSK1 485 aa17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 TSHZ2Q9NRE2 1034 aa17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 TMEM161AQ9NX61 479 aa17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 PUF60Q9UHX1 559 aaKnown RBP17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 AKT3Q9Y243 479 aa17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 TECTAO75443 2155 aa17.29■□□□□ 0.36
CSGALNACT1-204ENST00000517494 KLF18A0A0U1RQI7 1052 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 FSD2A1L4K1 749 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 ZBTB42B2RXF5 422 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 hCG_1984214I3L0E3 225 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 CA8P35219 290 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 CLCN3P51790 818 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 NIPA1Q7RTP0 329 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 FBXL6Q8N531 539 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 ZNF713Q8N859 430 aaPredicted RBP17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 ZNF668Q96K58 619 aaPredicted RBP17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 SCLT1Q96NL6 688 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 GLT8D2Q9H1C3 349 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 CWH43Q9H720 699 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 SAMM50Q9Y512 469 aa17.28■□□□□ 0.36
CSGALNACT1-204ENST00000517494 ZNF318Q5VUA4 2279 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 PLXNA4Q9HCM2 1894 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 FSCN2O14926 492 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 ATF7P17544 494 aaPredicted RBP17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 ATP4AP20648 1035 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 CLK2P49760 499 aaKnown RBP17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 FGD1P98174 961 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 SIGLEC14Q08ET2 396 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 FUT2Q10981 343 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 PKN1Q16512 942 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 PDE12Q6L8Q7 609 aaKnown RBP17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 ANKRD54Q6NXT1 300 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 BBXQ8WY36 941 aaPredicted RBP17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 SUSD6Q92537 303 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 MRPS27Q92552 414 aaKnown RBP17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 MAP7D2Q96T17 732 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 TMEM117Q9H0C3 514 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 FAM86C1Q9NVL1 165 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 GABBR1Q9UBS5 961 aa17.27■□□□□ 0.36
CSGALNACT1-204ENST00000517494 HIDE1A8MVS5 230 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 DHX15O43143 795 aaKnown RBP17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 HOXA2O43364 376 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 GPR32O75388 356 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 PSAPP07602 524 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ZSCAN20P17040 1043 aaPredicted RBP17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CDC27P30260 824 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 VCPP55072 806 aaKnown RBP17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 NLRP11P59045 1033 aaKnown RBP17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 SETQ01105 290 aaPredicted RBP17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 PRR16Q569H4 304 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 TMC7Q7Z402 723 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 TEX2Q8IWB9 1127 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 LRRC43Q8N309 656 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 LRRC71Q8N4P6 559 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ZNF558Q96NG5 402 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 PRRX2Q99811 253 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ELAC1Q9H777 363 aaKnown RBP17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CEP131Q9UPN4 1083 aa17.26■□□□□ 0.35
CSGALNACT1-204ENST00000517494 IGLV3-22A0A075B6J6 115 aa17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 KRT17Q04695 432 aa17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 DSC3Q14574 896 aa17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 PTPN21Q16825 1174 aa17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ZNF746Q6NUN9 644 aaPredicted RBP17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 KCNT2Q6UVM3 1135 aa17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 LRRC55Q6ZSA7 311 aa17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 FAM43BQ6ZT52 329 aaPredicted RBP17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CASD1Q96PB1 797 aa17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 TBC1D22BQ9NU19 505 aa17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 LZTS1Q9Y250 596 aa17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 MAFBQ9Y5Q3 323 aaPredicted RBP17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 LOXHD1Q8IVV2 1947 aa17.25■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ADAMTS3O15072 1205 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 TMOD1P28289 359 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 PPM1AP35813 382 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 METAP2P50579 478 aaKnown RBP eCLIP17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 FAM189BP81408 668 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 EXOSC10Q01780 885 aaKnown RBP17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 PLCB3Q01970 1234 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 TCF15Q12870 199 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 PFKFB3Q16875 520 aaPredicted RBP17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ADCK5Q3MIX3 580 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 EFCAB12Q6NXP0 572 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 SYCE2Q6PIF2 218 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 SMAP1Q8IYB5 467 aaPredicted RBP17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 REXO1Q8N1G1 1221 aaKnown RBP17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 S1PR5Q9H228 398 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 C6orf50Q9HD87 102 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 NGRNQ9NPE2 291 aaKnown RBP17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CDH22Q9UJ99 828 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 PCDHA10Q9Y5I2 948 aa17.24■□□□□ 0.35
CSGALNACT1-204ENST00000517494 MAGEB2O15479 319 aa17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CHMP2AO43633 222 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms