RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 A0A0U1RQG5 324 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 C22orf31O95567 290 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 RPLP2P05387 115 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 CDK7P50613 346 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 NPEPPSP55786 919 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 RTP1P59025 263 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 ITGA7Q13683 1181 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 SNX17Q15036 470 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 GRIK4Q16099 956 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 ARSHQ5FYA8 562 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 MARCH8Q5T0T0 291 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 PLA2G4FQ68DD2 849 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 RINT1Q6NUQ1 792 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 PADI6Q6TGC4 694 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 UBE2Q1Q7Z7E8 422 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 ZNF710Q8N1W2 664 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 LINC01465Q8N7H1 131 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 C7orf31Q8N865 590 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 MCPH1Q8NEM0 835 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 LMBR1Q8WVP7 490 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 DPF3Q92784 378 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 HTATIP2Q9BUP3 242 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 ODF2LQ9ULJ1 636 aa13.32□□□□□ -0.28
PDLIM5-220ENST00000514830 TMEM150BA6NC51 233 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 MYCP01106 439 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 TBC1D8BQ0IIM8 1120 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 MTERF2Q49AM1 385 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 GPBP1Q86WP2 473 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 SPATA20Q8TB22 786 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 SLC7A3Q8WY07 619 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 DNAJC19Q96DA6 116 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 CCDC43Q96MW1 224 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 TRIM9Q9C026 710 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 CLSTN2Q9H4D0 955 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 ATP6V0A4Q9HBG4 840 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 STARD7Q9NQZ5 370 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 BMP2KQ9NSY1 1161 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 HDAC6Q9UBN7 1215 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 COLQQ9Y215 455 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 PCDHA2Q9Y5H9 948 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 NR2E3Q9Y5X4 410 aa13.31□□□□□ -0.28
PDLIM5-220ENST00000514830 SIP14410 1827 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 DNAH12Q6ZR08 3092 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 A0A087WWV3 80 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 SMIM35A0A1B0GVV1 85 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 PVALEFA0A1B0GWK0 134 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 FRMD3A2A2Y4 597 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 C17orf102A2RUQ5 167 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 MYMKA6NI61 221 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 ARVCFO00192 962 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 KLRC1P26715 233 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 ZNF131P52739 623 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 POLGP54098 1239 aaPredicted RBP13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 DPYDQ12882 1025 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 EMC2Q15006 297 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 POSTNQ15063 836 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 NT5DC1Q5TFE4 455 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 MTHFD1LQ6UB35 978 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 RBM43Q6ZSC3 357 aaKnown RBP13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 TCP11Q8WWU5 503 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 DDX12PQ92771 950 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 KIFAP3Q92845 792 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 KCNN1Q92952 543 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 RUSC1Q9BVN2 902 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 C17orf75Q9HAS0 396 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 XPNPEP1Q9NQW7 623 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 SETD4Q9NVD3 440 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 TUBE1Q9UJT0 475 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 MROH7Q68CQ1 1323 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 TRIOBPQ9H2D6 2365 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 BRCA2P51587 3418 aa13.3□□□□□ -0.28
PDLIM5-220ENST00000514830 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 SCP2P22307 547 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 TMOD1P28289 359 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 ARL2P36404 184 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 CDC42EP1Q00587 391 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 EHHADHQ08426 723 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 MAPK7Q13164 816 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 GIT2Q14161 759 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 HIC1Q14526 733 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 IER5Q5VY09 327 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 TAF2Q6P1X5 1199 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 ANKRD33Q7Z3H0 272 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 SERINC5Q86VE9 423 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 DRC1Q96MC2 740 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 TOX2Q96NM4 488 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 GSDMAQ96QA5 445 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 CTAGE1Q96RT6 745 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 REEP2Q9BRK0 252 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 NUP62CLQ9H1M0 184 aa13.29□□□□□ -0.28
PDLIM5-220ENST00000514830 H0YGN5 161 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 ASAP2O43150 1006 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 USO1O60763 962 aaKnown RBP13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 CAND2O75155 1236 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 SSBP05455 408 aaKnown RBP eCLIP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms