RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 TCP11X2Q5H9J9 407 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 EPM2AIP1Q7L775 607 aaPredicted RBP17.66■□□□□ 0.42
NUP54-214ENST00000514307 CREBRFQ8IUR6 639 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 DNAJC5GQ8N7S2 189 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 PPTC7Q8NI37 304 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 GOLGA5Q8TBA6 731 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 SCFD1Q8WVM8 642 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 SLC7A3Q8WY07 619 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 APBA2Q99767 749 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 DUSP9Q99956 384 aaKnown RBP17.66■□□□□ 0.42
NUP54-214ENST00000514307 CFHR5Q9BXR6 569 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 XPO4Q9C0E2 1151 aaKnown RBP17.66■□□□□ 0.42
NUP54-214ENST00000514307 KATNBL1Q9H079 304 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 TMEM206Q9H813 350 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 ATP6V0A4Q9HBG4 840 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 IMPACTQ9P2X3 320 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 ZHX1Q9UKY1 873 aaPredicted RBP17.66■□□□□ 0.42
NUP54-214ENST00000514307 UBE4BO95155 1302 aa17.66■□□□□ 0.42
NUP54-214ENST00000514307 RSPH10B2B2RC85 870 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 KCNJ18B7U540 433 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 RSPH10BP0C881 870 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 ATP1A3P13637 1013 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 ADCYAP1R1P41586 468 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 POLGP54098 1239 aaPredicted RBP17.65■□□□□ 0.42
NUP54-214ENST00000514307 SNRPFP62306 86 aaKnown RBP17.65■□□□□ 0.42
NUP54-214ENST00000514307 SP3Q02447 781 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 ARHGAP1Q07960 439 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 KCNJ12Q14500 433 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 BMT2Q1RMZ1 405 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 EDRF1Q3B7T1 1238 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 CCDC144BQ3MJ40 725 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 HSDL1Q3SXM5 330 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 MFSD14CQ5VZR4 134 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 MAEAQ7L5Y9 396 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 FILIP1Q7Z7B0 1213 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 CEP63Q96MT8 703 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 NTPCRQ9BSD7 190 aaKnown RBP17.65■□□□□ 0.42
NUP54-214ENST00000514307 PDLIM7Q9NR12 457 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 ERAP1Q9NZ08 941 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 CGNQ9P2M7 1197 aaKnown RBP17.65■□□□□ 0.42
NUP54-214ENST00000514307 FAM184BQ9ULE4 1060 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 TRAF3IP3Q9Y228 551 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 Q9Y3F1 56 aa17.65■□□□□ 0.42
NUP54-214ENST00000514307 CETN3O15182 167 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 GAS2O43903 313 aaKnown RBP17.64■□□□□ 0.41
NUP54-214ENST00000514307 HBP1O60381 514 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 PRKCSHP14314 528 aaPredicted RBP17.64■□□□□ 0.41
NUP54-214ENST00000514307 ATP4AP20648 1035 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 LACTBP83111 547 aaPredicted RBP17.64■□□□□ 0.41
NUP54-214ENST00000514307 MTERF2Q49AM1 385 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 PLA2G4FQ68DD2 849 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 HS2ST1Q7LGA3 356 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 ATP8B4Q8TF62 1192 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 SPIRE2Q8WWL2 714 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 TCP11Q8WWU5 503 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 ACCSQ96QU6 501 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 PCYT2Q99447 389 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 ST6GALNAC4Q9H4F1 302 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 EXOC7Q9UPT5 735 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 EMSYQ7Z589 1322 aa17.64■□□□□ 0.41
NUP54-214ENST00000514307 TRIM49BA6NDI0 452 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 N4BP3O15049 544 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 PRPF6O94906 941 aaKnown RBP17.63■□□□□ 0.41
NUP54-214ENST00000514307 DNM2P50570 870 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 PMS1P54277 932 aaKnown RBP17.63■□□□□ 0.41
NUP54-214ENST00000514307 MAPK7Q13164 816 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 ADAM9Q13443 819 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 NR1I3Q14994 352 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 PPP2R5AQ15172 486 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 ZNF484Q5JVG2 852 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 NELFCDQ8IXH7 590 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 SYCP3Q8IZU3 236 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 DAW1Q8N136 415 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 OR6J1Q8NGC5 347 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 COPS5Q92905 334 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 HVCN1Q96D96 273 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 AP5M1Q9H0R1 490 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 POLD4Q9HCU8 107 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 TYW1Q9NV66 732 aaKnown RBP17.63■□□□□ 0.41
NUP54-214ENST00000514307 ZNF215Q9UL58 517 aaPredicted RBP17.63■□□□□ 0.41
NUP54-214ENST00000514307 TELO2Q9Y4R8 837 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 PCNTO95613 3336 aa17.63■□□□□ 0.41
NUP54-214ENST00000514307 A0A1B0GTH6 734 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 CCDC169A6NNP5 214 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 MAFO75444 373 aaPredicted RBP17.62■□□□□ 0.41
NUP54-214ENST00000514307 ECM2O94769 699 aaPredicted RBP17.62■□□□□ 0.41
NUP54-214ENST00000514307 GNRH1P01148 92 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 MYBP10242 640 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 SMPD1P17405 629 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 NMT1P30419 496 aaKnown RBP17.62■□□□□ 0.41
NUP54-214ENST00000514307 MTIF2P46199 727 aaKnown RBP17.62■□□□□ 0.41
NUP54-214ENST00000514307 PEX3P56589 373 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 GSDMDP57764 484 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 DMP1Q13316 513 aaPredicted RBP17.62■□□□□ 0.41
NUP54-214ENST00000514307 MYBPC2Q14324 1141 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 TARBP2Q15633 366 aaKnown RBP17.62■□□□□ 0.41
NUP54-214ENST00000514307 DGKDQ16760 1214 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 HSP90AA4PQ58FG1 418 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 IER5Q5VY09 327 aa17.62■□□□□ 0.41
NUP54-214ENST00000514307 HAUS6Q7Z4H7 955 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms