RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 COPB2P35606 906 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 XKR9Q5GH70 373 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 UTP14CQ5TAP6 766 aaKnown RBP16.42■□□□□ 0.22
VCAN-211ENST00000513984 ANO5Q75V66 913 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 HS2ST1Q7LGA3 356 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 NCAPG2Q86XI2 1143 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 BORCS6Q96GS4 357 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 ST6GALNAC4Q9H4F1 302 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 DMAC2Q9NW81 257 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 CEP72Q9P209 647 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 GABBR1Q9UBS5 961 aa16.42■□□□□ 0.22
VCAN-211ENST00000513984 REXO2Q9Y3B8 237 aaKnown RBP16.42■□□□□ 0.22
VCAN-211ENST00000513984 ZNF862O60290 1169 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 GRIN3BO60391 1043 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 NOL4O94818 638 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 STBD1O95210 358 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 AFPP02771 609 aaKnown RBP16.41■□□□□ 0.22
VCAN-211ENST00000513984 XRCC5P13010 732 aaKnown RBP16.41■□□□□ 0.22
VCAN-211ENST00000513984 CYLC1P35663 651 aaPredicted RBP16.41■□□□□ 0.22
VCAN-211ENST00000513984 CASP4P49662 377 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 ACTR2P61160 394 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 GNG11P61952 73 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 PLA2G4FQ68DD2 849 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 ABHD15Q6UXT9 468 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 OTUD6AQ7L8S5 288 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 SLC9A9Q8IVB4 645 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 KSR1Q8IVT5 923 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 FAM133AQ8N9E0 248 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 TMEM174Q8WUU8 243 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 PAGR1Q9BTK6 254 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 LZTFL1Q9NQ48 299 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 AGPAT3Q9NRZ7 376 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 IGSF9BQ9UPX0 1349 aa16.41■□□□□ 0.22
VCAN-211ENST00000513984 PLXNA1Q9UIW2 1896 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 A0A0U1RQJ8 604 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 SOWAHBA6NEL2 793 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 UNCXA6NJT0 531 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 POTEB2H3BUK9 544 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 PSMC2P35998 433 aaKnown RBP16.4■□□□□ 0.22
VCAN-211ENST00000513984 NPEPPSP55786 919 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 FSTL1Q12841 308 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 MYBPC2Q14324 1141 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 GPAT2Q6NUI2 795 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 PDXDC1Q6P996 788 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 MAEAQ7L5Y9 396 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 SLC17A8Q8NDX2 589 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 ATRIPQ8WXE1 791 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 WDR24Q96S15 920 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 LSM14BQ9BX40 385 aaKnown RBP16.4■□□□□ 0.22
VCAN-211ENST00000513984 IKZF4Q9H2S9 585 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 NHEJ1Q9H9Q4 299 aaPredicted RBP16.4■□□□□ 0.22
VCAN-211ENST00000513984 LRRC53A6NM62 1247 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 EIF3CLB5ME19 914 aaKnown RBP16.4■□□□□ 0.22
VCAN-211ENST00000513984 SUPT20HL2P0C7V6 817 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 OSBPP22059 807 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 GJA5P36382 358 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 ARHGAP25P42331 645 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 NCKAP1LP55160 1127 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 GTF2BQ00403 316 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 SP2Q02086 613 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 ARHGAP29Q52LW3 1261 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 MIS18BP1Q6P0N0 1132 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 ZNF662Q6ZS27 426 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 CCDC60Q8IWA6 550 aaPredicted RBP16.4■□□□□ 0.22
VCAN-211ENST00000513984 SLC35C1Q96A29 364 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 EIF3CQ99613 913 aaKnown RBP16.4■□□□□ 0.22
VCAN-211ENST00000513984 SH2D3AQ9BRG2 576 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 NUCKS1Q9H1E3 243 aaKnown RBP16.4■□□□□ 0.22
VCAN-211ENST00000513984 TMEM206Q9H813 350 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 TXNRD2Q9NNW7 524 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 RBPJLQ9UBG7 517 aa16.4■□□□□ 0.22
VCAN-211ENST00000513984 ATG7O95352 703 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 SIP14410 1827 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 KRT83P78385 493 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 SWSAP1Q6NVH7 229 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 SRCAPQ6ZRS2 3230 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 RRAGAQ7L523 313 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 CACNA2D4Q7Z3S7 1137 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 FAM186BQ8IYM0 893 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 SYN2Q92777 582 aaPredicted RBP16.39■□□□□ 0.21
VCAN-211ENST00000513984 ACCSQ96QU6 501 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 GANQ9H2C0 597 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 PLCB1Q9NQ66 1216 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 CGNQ9P2M7 1197 aaKnown RBP16.39■□□□□ 0.21
VCAN-211ENST00000513984 TELO2Q9Y4R8 837 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 PLXNB2O15031 1838 aa16.39■□□□□ 0.21
VCAN-211ENST00000513984 GTPBP10A4D1E9 387 aaKnown RBP16.38■□□□□ 0.21
VCAN-211ENST00000513984 KIF5CO60282 957 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 CASQ1P31415 396 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 SNAPC2Q13487 334 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 DPY19L2P1Q6NXN4 242 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 C12orf56Q8IXR9 622 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 SYCP3Q8IZU3 236 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 CRACR2AQ9BSW2 395 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 GPRC5CQ9NQ84 441 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 ARHGAP20Q9P2F6 1191 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 MYO1AQ9UBC5 1043 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 SYNGAP1Q96PV0 1343 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 SNRPFP62306 86 aaKnown RBP16.38■□□□□ 0.21
VCAN-211ENST00000513984 PRKCEQ02156 737 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms