RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ZNF808Q8N4W9 903 aaPredicted RBP3.54□□□□□ -1.84
PDGFC-208ENST00000512711 ZSWIM2Q8NEG5 633 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 IL17DQ8TAD2 202 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 EDAQ92838 391 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 ZNF503Q96F45 646 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 TMEM176AQ96HP8 235 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 MENTQ9BUN1 341 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 MRIQ9BWK5 157 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 MRPL4Q9BYD3 311 aaKnown RBP3.54□□□□□ -1.84
PDGFC-208ENST00000512711 SEMA4AQ9H3S1 761 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 PLA2G3Q9NZ20 509 aa3.54□□□□□ -1.84
PDGFC-208ENST00000512711 C2orf78A6NCI8 922 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 FZD7O75084 574 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 DNAJC8O75937 253 aaPredicted RBP3.53□□□□□ -1.84
PDGFC-208ENST00000512711 GLRX3O76003 335 aaKnown RBP3.53□□□□□ -1.84
PDGFC-208ENST00000512711 PTX3P26022 381 aaPredicted RBP3.53□□□□□ -1.84
PDGFC-208ENST00000512711 MSX2P35548 267 aaPredicted RBP3.53□□□□□ -1.84
PDGFC-208ENST00000512711 GDF5P43026 501 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 RGS3P49796 1198 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 ATP2C1P98194 919 aaPredicted RBP3.53□□□□□ -1.84
PDGFC-208ENST00000512711 BMS1Q14692 1282 aaKnown RBP3.53□□□□□ -1.84
PDGFC-208ENST00000512711 GRAMD4Q6IC98 578 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 RNF207Q6ZRF8 634 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 OTOP1Q7RTM1 612 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 RTKN2Q8IZC4 609 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 WDR48Q8TAF3 677 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 ZNF341Q9BYN7 854 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 OR10A2Q9H208 303 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 SAMD15Q9P1V8 674 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 PUF60Q9UHX1 559 aaKnown RBP3.53□□□□□ -1.84
PDGFC-208ENST00000512711 FBXO10Q9UK96 956 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 FAM184BQ9ULE4 1060 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 ASB1Q9Y576 335 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 TNPO3Q9Y5L0 923 aaKnown RBP3.53□□□□□ -1.84
PDGFC-208ENST00000512711 SLC30A1Q9Y6M5 507 aa3.53□□□□□ -1.84
PDGFC-208ENST00000512711 CCDC163A0A0D9SF12 145 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 PLD2O14939 933 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 NARSO43776 548 aaKnown RBP3.52□□□□□ -1.85
PDGFC-208ENST00000512711 C1SP09871 688 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 APEX1P27695 318 aaKnown RBP3.52□□□□□ -1.85
PDGFC-208ENST00000512711 KIF11P52732 1056 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 SLC6A3Q01959 620 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 GRM7Q14831 915 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 C21orf62-AS1Q17RA5 79 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 ZNF568Q3ZCX4 644 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 HS1BP3Q53T59 392 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 MIIPQ5JXC2 388 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 ZCCHC8Q6NZY4 707 aaKnown RBP3.52□□□□□ -1.85
PDGFC-208ENST00000512711 C1orf210Q8IVY1 113 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 OSBPL2Q9H1P3 480 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 PCED1AQ9H1Q7 454 aa3.52□□□□□ -1.85
PDGFC-208ENST00000512711 PTPDC1A2A3K4 754 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 NPTXRO95502 500 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 SLC9A1P19634 815 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 HIBADHP31937 336 aaKnown RBP3.51□□□□□ -1.85
PDGFC-208ENST00000512711 MEOX1P50221 254 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 ADCY7P51828 1080 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 ALDH6A1Q02252 535 aaKnown RBP3.51□□□□□ -1.85
PDGFC-208ENST00000512711 SOGA3Q5TF21 947 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 FNDC7Q5VTL7 733 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 CC2D1AQ6P1N0 951 aaPredicted RBP3.51□□□□□ -1.85
PDGFC-208ENST00000512711 UNQ6494/PRO21346Q6UXR6 183 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 POLNQ7Z5Q5 900 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 RPL10LQ96L21 214 aaKnown RBP3.51□□□□□ -1.85
PDGFC-208ENST00000512711 GPHA2Q96T91 129 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 BOCQ9BWV1 1114 aa3.51□□□□□ -1.85
PDGFC-208ENST00000512711 CTDP1Q9Y5B0 961 aaPredicted RBP3.51□□□□□ -1.85
PDGFC-208ENST00000512711 FAM83GA6ND36 823 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 CYR61O00622 381 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 SLC26A4O43511 780 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 HIP1RO75146 1068 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 PRLP01236 227 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 RPS19P39019 145 aaKnown RBP3.5□□□□□ -1.85
PDGFC-208ENST00000512711 LSM12Q3MHD2 195 aaKnown RBP3.5□□□□□ -1.85
PDGFC-208ENST00000512711 PIK3R6Q5UE93 754 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 SGMS1Q86VZ5 419 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 SHCBP1Q8NEM2 672 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 CALML6Q8TD86 181 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 SH3TC2Q8TF17 1288 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 C16orf92Q96LL3 132 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 PLEKHG4BQ96PX9 1271 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 ELF4Q99607 663 aaPredicted RBP3.5□□□□□ -1.85
PDGFC-208ENST00000512711 CSRNP2Q9H175 543 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 TLR9Q9NR96 1032 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 H2AFY2Q9P0M6 372 aaPredicted RBP3.5□□□□□ -1.85
PDGFC-208ENST00000512711 SH3BP1Q9Y3L3 701 aa3.5□□□□□ -1.85
PDGFC-208ENST00000512711 OPA1O60313 960 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 ASMTLO95671 621 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 JMJD7P0C870 316 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 IGFALSP35858 605 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 ADAM8P78325 824 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 RIN1Q13671 783 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 MYBPC3Q14896 1274 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 ARHGAP44Q17R89 818 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 CCDC144BQ3MJ40 725 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 FNDC3BQ53EP0 1204 aaKnown RBP3.49□□□□□ -1.85
PDGFC-208ENST00000512711 CREB3L3Q68CJ9 461 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 CDCA2Q69YH5 1023 aaPredicted RBP3.49□□□□□ -1.85
PDGFC-208ENST00000512711 ESRP1Q6NXG1 681 aaKnown RBP3.49□□□□□ -1.85
PDGFC-208ENST00000512711 ADGRE4PQ86SQ3 457 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms