RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 C7orf25Q9BPX7 421 aa12.24□□□□□ -0.45
BRCC3P1-201ENST00000508559 ANP32EQ9BTT0 268 aa12.24□□□□□ -0.45
BRCC3P1-201ENST00000508559 RUSC1Q9BVN2 902 aa12.24□□□□□ -0.45
BRCC3P1-201ENST00000508559 TIPINQ9BVW5 301 aa12.24□□□□□ -0.45
BRCC3P1-201ENST00000508559 SUGCTQ9HAC7 445 aa12.24□□□□□ -0.45
BRCC3P1-201ENST00000508559 STARD7Q9NQZ5 370 aa12.24□□□□□ -0.45
BRCC3P1-201ENST00000508559 SETD4Q9NVD3 440 aa12.24□□□□□ -0.45
BRCC3P1-201ENST00000508559 RMND1Q9NWS8 449 aa12.24□□□□□ -0.45
BRCC3P1-201ENST00000508559 NOD1Q9Y239 953 aa12.24□□□□□ -0.45
BRCC3P1-201ENST00000508559 NRCAMQ92823 1304 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 NPHP3-ACAD11A0A0J9YXS1 232 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 MAGEB2O15479 319 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 GAS2O43903 313 aaKnown RBP12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 STBD1O95210 358 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 PRR29P0C7W0 189 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 CYP11B2P19099 503 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 CASP1P29466 404 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 EMC2Q15006 297 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 MYCT1Q8N699 235 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 LRRC15Q8TF66 581 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 TRAPPC12Q8WVT3 735 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 TCP11Q8WWU5 503 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 IFT74Q96LB3 600 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 DRC1Q96MC2 740 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 MAP7D2Q96T17 732 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 MTRQ99707 1265 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 TRIM9Q9C026 710 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 PANK4Q9NVE7 773 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 TMEM63CQ9P1W3 806 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 OGDHLQ9ULD0 1010 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 COL4A3BPQ9Y5P4 624 aa12.23□□□□□ -0.45
BRCC3P1-201ENST00000508559 A0A0U1RQG5 324 aaPredicted RBP12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 A0A1W2PQ45 241 aaPredicted RBP12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 A0A1W2PQY0 241 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 HAS3O00219 553 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 BIN1O00499 593 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 HIP1RO75146 1068 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 RPN1P04843 607 aaKnown RBP12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 CAPN2P17655 700 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 GAP43P17677 238 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 GUCY2CP25092 1073 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 KLRC1P26715 233 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 ITGA7Q13683 1181 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 ARSHQ5FYA8 562 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 HERC4Q5GLZ8 1057 aaPredicted RBP12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 EFCAB12Q6NXP0 572 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 C1orf186Q6ZWK4 172 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 SH3RF1Q7Z6J0 888 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 PPP1R13LQ8WUF5 828 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 KIFAP3Q92845 792 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 ERCC4Q92889 916 aaPredicted RBP12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 SCLT1Q96NL6 688 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 REEP2Q9BRK0 252 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 POLR3FQ9H1D9 316 aaPredicted RBP12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 PARVGQ9HBI0 331 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 KIAA1468Q9P260 1216 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 HDAC6Q9UBN7 1215 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 TUBE1Q9UJT0 475 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 ODF2LQ9ULJ1 636 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 PHF24Q9UPV7 400 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 AKT3Q9Y243 479 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 PCDHA5Q9Y5H7 936 aa12.22□□□□□ -0.45
BRCC3P1-201ENST00000508559 PVALEFA0A1B0GWK0 134 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 CCDC169A6NNP5 214 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 MAFO75444 373 aaPredicted RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 CYP2C9P11712 490 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 GJA8P48165 433 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 SMTNP53814 917 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 MDM2Q00987 491 aaPredicted RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 DPYDQ12882 1025 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 GIT2Q14161 759 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 TARBP2Q15633 366 aaKnown RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 L1TD1Q5T7N2 865 aaKnown RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 IER5Q5VY09 327 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 CCSAPQ6IQ19 270 aaPredicted RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 CNNM4Q6P4Q7 775 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 NFRKBQ6P4R8 1299 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 MTHFD1LQ6UB35 978 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 UNC13DQ70J99 1090 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 LRRC71Q8N4P6 559 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 LMBR1Q8WVP7 490 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 PSPC1Q8WXF1 523 aaKnown RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 TMEM143Q96AN5 459 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 GSDMAQ96QA5 445 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 SEZ6LQ9BYH1 1024 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 GTPBP4Q9BZE4 634 aaKnown RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 SENP6Q9GZR1 1112 aaPredicted RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 DHX33Q9H6R0 707 aaKnown RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 POLD4Q9HCU8 107 aa12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 LARSQ9P2J5 1176 aaKnown RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 SUCLA2Q9P2R7 463 aaPredicted RBP12.21□□□□□ -0.45
BRCC3P1-201ENST00000508559 SYCE3A1L190 88 aa12.2□□□□□ -0.46
BRCC3P1-201ENST00000508559 SFI1A8K8P3 1242 aa12.2□□□□□ -0.46
BRCC3P1-201ENST00000508559 ZBTB42B2RXF5 422 aa12.2□□□□□ -0.46
BRCC3P1-201ENST00000508559 C22orf31O95567 290 aa12.2□□□□□ -0.46
BRCC3P1-201ENST00000508559 CLCN3P51790 818 aa12.2□□□□□ -0.46
BRCC3P1-201ENST00000508559 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
BRCC3P1-201ENST00000508559 DMP1Q13316 513 aaPredicted RBP12.2□□□□□ -0.46
BRCC3P1-201ENST00000508559 STIM1Q13586 685 aa12.2□□□□□ -0.46
BRCC3P1-201ENST00000508559 TFDP1Q14186 410 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms