RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 ECHS1P30084 290 aa13.78□□□□□ -0.2
DDR1-262ENST00000508312 SPTY2D1Q68D10 685 aaPredicted RBP13.78□□□□□ -0.2
DDR1-262ENST00000508312 RNF10Q8N5U6 811 aaKnown RBP13.78□□□□□ -0.2
DDR1-262ENST00000508312 B4GALNT2Q8NHY0 566 aa13.78□□□□□ -0.2
DDR1-262ENST00000508312 TBC1D5Q92609 795 aa13.78□□□□□ -0.2
DDR1-262ENST00000508312 CDK5RAP3Q96JB5 506 aa13.78□□□□□ -0.2
DDR1-262ENST00000508312 ERGIC2Q96RQ1 377 aa13.78□□□□□ -0.2
DDR1-262ENST00000508312 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
DDR1-262ENST00000508312 SEC63Q9UGP8 760 aaKnown RBP13.78□□□□□ -0.2
DDR1-262ENST00000508312 GGA1Q9UJY5 639 aa13.78□□□□□ -0.2
DDR1-262ENST00000508312 A0A1W2PQJ5 194 aa13.77□□□□□ -0.2
DDR1-262ENST00000508312 PALM3A6NDB9 673 aaPredicted RBP13.77□□□□□ -0.2
DDR1-262ENST00000508312 NFIAQ12857 509 aa13.77□□□□□ -0.2
DDR1-262ENST00000508312 LRRC14Q15048 493 aa13.77□□□□□ -0.2
DDR1-262ENST00000508312 IFI16Q16666 785 aaKnown RBP13.77□□□□□ -0.2
DDR1-262ENST00000508312 ZC3H12AQ5D1E8 599 aaKnown RBP13.77□□□□□ -0.2
DDR1-262ENST00000508312 SOGA3Q5TF21 947 aa13.77□□□□□ -0.2
DDR1-262ENST00000508312 LMNTD2Q8IXW0 634 aa13.77□□□□□ -0.2
DDR1-262ENST00000508312 PACSIN1Q9BY11 444 aa13.77□□□□□ -0.2
DDR1-262ENST00000508312 TRIM4Q9C037 500 aa13.77□□□□□ -0.2
DDR1-262ENST00000508312 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.2
DDR1-262ENST00000508312 NPHP3-ACAD11A0A0J9YXS1 232 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 M0R2N6 131 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 TTI1O43156 1089 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 MSH2P43246 934 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 SLC9C1Q4G0N8 1177 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 VWA3BQ502W6 1294 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 MEX3CQ5U5Q3 659 aaKnown RBP13.77□□□□□ -0.21
DDR1-262ENST00000508312 ADAT2Q7Z6V5 191 aaKnown RBP13.77□□□□□ -0.21
DDR1-262ENST00000508312 FGFBP2Q9BYJ0 223 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 TRIM9Q9C026 710 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 BCAS3Q9H6U6 928 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 NRAPQ86VF7 1730 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 RGS16O15492 202 aaPredicted RBP13.77□□□□□ -0.21
DDR1-262ENST00000508312 OR52Z1P0C646 297 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 RHBDL3P58872 404 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 ITIH4Q14624 930 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 CCDC38Q502W7 563 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 TMC3Q7Z5M5 1100 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 HOOK3Q86VS8 718 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 GIMAP8Q8ND71 665 aaPredicted RBP13.77□□□□□ -0.21
DDR1-262ENST00000508312 FBF1Q8TES7 1133 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 DHTKD1Q96HY7 919 aaPredicted RBP13.77□□□□□ -0.21
DDR1-262ENST00000508312 MMTAG2Q9BU76 263 aaKnown RBP13.77□□□□□ -0.21
DDR1-262ENST00000508312 PPP1R12CQ9BZL4 782 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 AZI2Q9H6S1 392 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 MLXIPLQ9NP71 852 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 ADAMTS1Q9UHI8 967 aa13.77□□□□□ -0.21
DDR1-262ENST00000508312 A0A1B0GUL6 1792 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 A0A1B0GVG6 124 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 F8VZ95 297 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 H0Y3Z8 333 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 RARAP10276 462 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 ROR2Q01974 943 aaKnown RBP13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP4Q13107 963 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 RAPGEF1Q13905 1077 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 NONOQ15233 471 aaKnown RBP eCLIP13.76□□□□□ -0.21
DDR1-262ENST00000508312 ECM1Q16610 540 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 USP17L6PQ6QN14 398 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 MFN1Q8IWA4 741 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 KIAA0895Q8NCT3 520 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 EZH1Q92800 747 aaPredicted RBP13.76□□□□□ -0.21
DDR1-262ENST00000508312 IFT74Q96LB3 600 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 ZNF317Q96PQ6 595 aaPredicted RBP13.76□□□□□ -0.21
DDR1-262ENST00000508312 DBNDD1Q9H9R9 158 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 PNMA3Q9UL41 463 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 SCAF8Q9UPN6 1271 aaKnown RBP13.76□□□□□ -0.21
DDR1-262ENST00000508312 C2CD2Q9Y426 696 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 ITGA4P13612 1032 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 PRPF4BQ13523 1007 aaKnown RBP13.76□□□□□ -0.21
DDR1-262ENST00000508312 MEI1Q5TIA1 1274 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 LONP2Q86WA8 852 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 CERS5Q8N5B7 392 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 CNKSR1Q969H4 720 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 ADAM22Q9P0K1 906 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 DAGLAQ9Y4D2 1042 aa13.76□□□□□ -0.21
DDR1-262ENST00000508312 ASAP2O43150 1006 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 TUBP50607 506 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 IFI35P80217 286 aaPredicted RBP13.75□□□□□ -0.21
DDR1-262ENST00000508312 REXO1Q8N1G1 1221 aaKnown RBP13.75□□□□□ -0.21
DDR1-262ENST00000508312 TBC1D16Q8TBP0 767 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 BORCS6Q96GS4 357 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 TRIM51Q9BSJ1 452 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 UTP11Q9Y3A2 253 aaKnown RBP13.75□□□□□ -0.21
DDR1-262ENST00000508312 AFF2P51816 1311 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
DDR1-262ENST00000508312 PJA2O43164 708 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 MAP3K13O43283 966 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 GYS1P13807 737 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 STAT3P40763 770 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 FIGNQ5HY92 759 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms