RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 GPRC5DQ9NZD1 345 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 MRPL11Q9Y3B7 192 aaKnown RBP18.52■□□□□ 0.56
LIN54-204ENST00000505397 OPLAHO14841 1288 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 HEXIM1O94992 359 aaKnown RBP18.52■□□□□ 0.56
LIN54-204ENST00000505397 SPATA31C1P0DKV0 1188 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 RPA1P27694 616 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 LENG9Q96B70 501 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 ARL8AQ96BM9 186 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 ZIM3Q96PE6 472 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.52■□□□□ 0.56
LIN54-204ENST00000505397 CAPS2Q9BXY5 557 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 PLEKHA4Q9H4M7 779 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 NENFQ9UMX5 172 aa18.52■□□□□ 0.56
LIN54-204ENST00000505397 ATP8B3O60423 1300 aa18.52■□□□□ 0.55
LIN54-204ENST00000505397 PSMC6P62333 389 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 PTK2Q05397 1052 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 KNOP1Q1ED39 458 aaKnown RBP18.51■□□□□ 0.55
LIN54-204ENST00000505397 UIMC1Q96RL1 719 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 KIAA1683Q9H0B3 1180 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 EPB41L5Q9HCM4 733 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 BZW2Q9Y6E2 419 aaKnown RBP18.51■□□□□ 0.55
LIN54-204ENST00000505397 SBF1O95248 1867 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 UCHL3P15374 230 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 MAGEA9P43362 315 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 ARID5AQ03989 594 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 PAK2Q13177 524 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 BMT2Q1RMZ1 405 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 PRR16Q569H4 304 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 DNAJC21Q5F1R6 531 aaKnown RBP18.51■□□□□ 0.55
LIN54-204ENST00000505397 ZNF571Q7Z3V5 609 aaPredicted RBP18.51■□□□□ 0.55
LIN54-204ENST00000505397 USP38Q8NB14 1042 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 TRPM4Q8TD43 1214 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 FBXL5Q9UKA1 691 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 NFU1Q9UMS0 254 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 UTRNP46939 3433 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 GCOM1H8Y6P7 765 aaPredicted RBP18.51■□□□□ 0.55
LIN54-204ENST00000505397 PDXKO00764 312 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 EIF3HO15372 352 aaKnown RBP eCLIP18.51■□□□□ 0.55
LIN54-204ENST00000505397 KRT18P05783 430 aaKnown RBP18.51■□□□□ 0.55
LIN54-204ENST00000505397 FAM153BP0C7A2 387 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 POLR2MP0CAP2 368 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 ACTN1P12814 892 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 SLC9A1P19634 815 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 INPP5BP32019 993 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 ZNF76P36508 570 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 PRKCIP41743 596 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 FAM153CQ494X1 144 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 CD302Q8IX05 232 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 EHMT1Q9H9B1 1298 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 ARMCX3Q9UH62 379 aaPredicted RBP18.51■□□□□ 0.55
LIN54-204ENST00000505397 FAM153AQ9UHL3 310 aa18.51■□□□□ 0.55
LIN54-204ENST00000505397 PACSIN2Q9UNF0 486 aaPredicted RBP18.51■□□□□ 0.55
LIN54-204ENST00000505397 ZSCAN5CA6NGD5 496 aaPredicted RBP18.5■□□□□ 0.55
LIN54-204ENST00000505397 AFPP02771 609 aaKnown RBP18.5■□□□□ 0.55
LIN54-204ENST00000505397 ZBTB48P10074 688 aaPredicted RBP18.5■□□□□ 0.55
LIN54-204ENST00000505397 PON1P27169 355 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 EPS15P42566 896 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 GUCY2DQ02846 1103 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 EMC10Q5UCC4 262 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 PIK3R5Q8WYR1 880 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 ZFP91Q96JP5 570 aaPredicted RBP18.5■□□□□ 0.55
LIN54-204ENST00000505397 REEP2Q9BRK0 252 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 FHDC1Q9C0D6 1143 aaPredicted RBP18.5■□□□□ 0.55
LIN54-204ENST00000505397 GGA3Q9NZ52 723 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 LRRC57Q8N9N7 239 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 EIF1ADQ8N9N8 165 aaKnown RBP18.5■□□□□ 0.55
LIN54-204ENST00000505397 PRPF38AQ8NAV1 312 aaKnown RBP18.5■□□□□ 0.55
LIN54-204ENST00000505397 CASKIN2Q8WXE0 1202 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 KRT12Q99456 494 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 DNM3Q9UQ16 869 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 STK24Q9Y6E0 443 aa18.5■□□□□ 0.55
LIN54-204ENST00000505397 A6NNZ2 444 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 ANXA13P27216 316 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 EPHA7Q15375 998 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 TUBB8Q3ZCM7 444 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 LDHDQ86WU2 507 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 SFR1Q86XK3 245 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 ERMNQ8TAM6 284 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 WRNIP1Q96S55 665 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 AS3MTQ9HBK9 375 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 PICK1Q9NRD5 415 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 BHMG1C9JSJ3 638 aaPredicted RBP18.49■□□□□ 0.55
LIN54-204ENST00000505397 MTMR2Q13614 643 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 SCYL3Q8IZE3 742 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 C1orf131Q8NDD1 294 aaKnown RBP18.49■□□□□ 0.55
LIN54-204ENST00000505397 RBM46Q8TBY0 533 aaKnown RBP18.49■□□□□ 0.55
LIN54-204ENST00000505397 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.49■□□□□ 0.55
LIN54-204ENST00000505397 RUFY1Q96T51 708 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 NAGPAQ9UK23 515 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 CCPG1Q9ULG6 757 aa18.49■□□□□ 0.55
LIN54-204ENST00000505397 ESYT3A0FGR9 886 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 ZNF233A6NK53 670 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 CALUO43852 315 aaPredicted RBP18.48■□□□□ 0.55
LIN54-204ENST00000505397 JAM2P57087 298 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 EXOC3L4Q17RC7 722 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 WHAMMQ8TF30 809 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 SCFD2Q8WU76 684 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 FAM20AQ96MK3 541 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 ZHX3Q9H4I2 956 aa18.48■□□□□ 0.55
LIN54-204ENST00000505397 SIX2Q9NPC8 291 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms