RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 CFHR4Q92496 578 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 SCLYQ96I15 445 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 MAGEB10Q96LZ2 347 aaPredicted RBP5.98□□□□□ -1.45
SUB1-204ENST00000504016 OR10A5Q9H207 317 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 OR10A2Q9H208 303 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 TMEM260Q9NX78 707 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 PLA2G3Q9NZ20 509 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 FAM184BQ9ULE4 1060 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 CD2APQ9Y5K6 639 aa5.98□□□□□ -1.45
SUB1-204ENST00000504016 MCM7P33993 719 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 HHEXQ03014 270 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 SEC23AQ15436 765 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 KANK2Q63ZY3 851 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 HOMER1Q86YM7 354 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 HIPK4Q8NE63 616 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 OR14K1Q8NGZ2 314 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 IL17DQ8TAD2 202 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 APPBP2Q92624 585 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 NELFAQ9H3P2 528 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 MSL2Q9HCI7 577 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 COQ6Q9Y2Z9 468 aa5.97□□□□□ -1.45
SUB1-204ENST00000504016 CCDC163A0A0D9SF12 145 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 TLDC2A0PJX2 215 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 PRAMEF22A3QJZ6 481 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 NARSO43776 548 aaKnown RBP5.96□□□□□ -1.46
SUB1-204ENST00000504016 CDC45O75419 566 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 C1SP09871 688 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 SDSP20132 328 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 ACRV1P26436 265 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 GRM7Q14831 915 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 TMEM200BQ69YZ2 307 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 GRAMD4Q6IC98 578 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 SGMS1Q86VZ5 419 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 ASB15Q8WXK1 588 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 GBP4Q96PP9 640 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 MRPL4Q9BYD3 311 aaKnown RBP5.96□□□□□ -1.46
SUB1-204ENST00000504016 TLR9Q9NR96 1032 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 KCNH7Q9NS40 1196 aa5.96□□□□□ -1.46
SUB1-204ENST00000504016 PLD2O14939 933 aa5.95□□□□□ -1.46
SUB1-204ENST00000504016 FOXP2O15409 715 aa5.95□□□□□ -1.46
SUB1-204ENST00000504016 EFCAB14O75071 495 aa5.95□□□□□ -1.46
SUB1-204ENST00000504016 STAT5BP51692 787 aa5.95□□□□□ -1.46
SUB1-204ENST00000504016 PABPC4Q13310 644 aaKnown RBP eCLIP5.95□□□□□ -1.46
SUB1-204ENST00000504016 NOSTRINQ8IVI9 506 aa5.95□□□□□ -1.46
SUB1-204ENST00000504016 DHX37Q8IY37 1157 aaKnown RBP5.95□□□□□ -1.46
SUB1-204ENST00000504016 GPR135Q8IZ08 494 aa5.95□□□□□ -1.46
SUB1-204ENST00000504016 GSTCDQ8NEC7 633 aa5.95□□□□□ -1.46
SUB1-204ENST00000504016 TRIM39Q9HCM9 518 aa5.95□□□□□ -1.46
SUB1-204ENST00000504016 TBX22Q9Y458 520 aa5.95□□□□□ -1.46
SUB1-204ENST00000504016 WDR33Q9C0J8 1336 aaKnown RBP5.95□□□□□ -1.46
SUB1-204ENST00000504016 OPA1O60313 960 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 ZNF460Q14592 562 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 TMEM132BQ14DG7 1078 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 ABHD17CQ6PCB6 329 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 C16orf86Q6ZW13 317 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 D2HGDHQ8N465 521 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 SHCBP1Q8NEM2 672 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 CALML6Q8TD86 181 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 CHFRQ96EP1 664 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 TMEM176AQ96HP8 235 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 TRIM8Q9BZR9 551 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 ASB1Q9Y576 335 aa5.94□□□□□ -1.46
SUB1-204ENST00000504016 TNPO3Q9Y5L0 923 aaKnown RBP5.94□□□□□ -1.46
SUB1-204ENST00000504016 TCRBV16S1A1N1A0A5B0 115 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 SLC26A4O43511 780 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 DNAJC8O75937 253 aaPredicted RBP5.93□□□□□ -1.46
SUB1-204ENST00000504016 HGFACQ04756 655 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 TUBA3CQ13748 450 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 TCEA2Q15560 299 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 TM4SF20Q53R12 229 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 TRIM61Q5EBN2 209 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 CNNM4Q6P4Q7 775 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 TUBA3EQ6PEY2 450 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 ADGRE4PQ86SQ3 457 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 IGSF22Q8N9C0 903 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 CACTINQ8WUQ7 758 aaKnown RBP5.93□□□□□ -1.46
SUB1-204ENST00000504016 NEU4Q8WWR8 484 aaPredicted RBP5.93□□□□□ -1.46
SUB1-204ENST00000504016 ERCC4Q92889 916 aaPredicted RBP5.93□□□□□ -1.46
SUB1-204ENST00000504016 CELF4Q9BZC1 486 aaKnown RBP5.93□□□□□ -1.46
SUB1-204ENST00000504016 AURKAIP1Q9NWT8 199 aaPredicted RBP5.93□□□□□ -1.46
SUB1-204ENST00000504016 C11orf21Q9P2W6 132 aa5.93□□□□□ -1.46
SUB1-204ENST00000504016 TMA7Q9Y2S6 64 aaKnown RBP5.93□□□□□ -1.46
SUB1-204ENST00000504016 SLC12A8A0AV02 714 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 CAPN14A8MX76 684 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 GOLGA6L22H0YM25 854 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 HIP1RO75146 1068 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 KCNA6P17658 529 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 APEX1P27695 318 aaKnown RBP5.92□□□□□ -1.46
SUB1-204ENST00000504016 DPTQ07507 201 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 MAP3K12Q12852 859 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 FNDC3BQ53EP0 1204 aaKnown RBP5.92□□□□□ -1.46
SUB1-204ENST00000504016 SDE2Q6IQ49 451 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 FSTL4Q6MZW2 842 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 THEMISQ8N1K5 641 aaPredicted RBP5.92□□□□□ -1.46
SUB1-204ENST00000504016 AMER2Q8N7J2 671 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 GIT1Q9Y2X7 761 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 B3GALT1Q9Y5Z6 326 aa5.92□□□□□ -1.46
SUB1-204ENST00000504016 PMS2P1A4D2B8 440 aa5.91□□□□□ -1.46
SUB1-204ENST00000504016 RASSF10A6NK89 507 aa5.91□□□□□ -1.46
SUB1-204ENST00000504016 KRT37O76014 449 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms