RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	TAF2	Q6P1X5	1199 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	LYPD8	Q6UX82	237 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	KRT25	Q7Z3Z0	450 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	TBCK	Q8TEA7	893 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	EVPL	Q92817	2033 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	NKX2-4	Q9H2Z4	354 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	ZNF576	Q9H609	170 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	TBC1D22B	Q9NU19	505 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	ORC3	Q9UBD5	711 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	LIMD1	Q9UGP4	676 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	STXBP5L	Q9Y2K9	1186 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	TELO2	Q9Y4R8	837 aa		12.07	□□□□□ -0.48
CDK11A-222	ENST00000498810	RRN3P2	A6NIE6	340 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810		J3QL48	77 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	GAS7	O60861	476 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	LGR5	O75473	907 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	RABGGTB	P53611	331 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	KRT76	Q01546	638 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	IKBKE	Q14164	716 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	CTC1	Q2NKJ3	1217 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	RASIP1	Q5U651	963 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	PDXDC2P	Q6P474	469 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	TRMT1L	Q7Z2T5	733 aa	Known RBP	12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	FAM177A1	Q8N128	213 aa	Predicted RBP	12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	NECAB1	Q8N987	351 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	MYLIP	Q8WY64	445 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	SEPT8	Q92599	483 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	WNT8B	Q93098	351 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	AIFM3	Q96NN9	605 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	TEKT3	Q9BXF9	490 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	SEMA6B	Q9H3T3	888 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	ZNF302	Q9NR11	478 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	KCNJ14	Q9UNX9	436 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	SZT2	Q5T011	3432 aa		12.06	□□□□□ -0.48
CDK11A-222	ENST00000498810	WDR64	B1ANS9	1081 aa		12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	RPLP2	P05387	115 aa	Known RBP	12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	PSAP	P07602	524 aa		12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	SLC26A2	P50443	739 aa		12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	LRCH2	Q5VUJ6	765 aa		12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	GTF3C6	Q969F1	213 aa		12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	GUCD1	Q96NT3	240 aa		12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	CTAGE1	Q96RT6	745 aa		12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	CDX2	Q99626	313 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	TTYH1	Q9H313	450 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	PCDHA11	Q9Y5I1	949 aa		12.05	□□□□□ -0.48
CDK11A-222	ENST00000498810	NLRC5	Q86WI3	1866 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	COL4A4	P53420	1690 aa	Predicted RBP	12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	LAMA2	P24043	3122 aa	Known RBP	12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	IGLV3-22	A0A075B6J6	115 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	ABHD14A-ACY1	A0A1B0GW23	586 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	SIAH2	O43255	324 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	NBN	O60934	754 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	AMH	P03971	560 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	INSRR	P14616	1297 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	KRT2	P35908	639 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	USP11	P51784	963 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	WDR5	P61964	334 aa	Known RBP	12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	SH3BP2	P78314	561 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	PLCB4	Q15147	1175 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	INF2	Q27J81	1249 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	TRIM71	Q2Q1W2	868 aa	Known RBP	12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	LETM2	Q2VYF4	491 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	SWSAP1	Q6NVH7	229 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	FAM117B	Q6P1L5	589 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	PLPPR4	Q7Z2D5	763 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	MYOCD	Q8IZQ8	938 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	DAGLB	Q8NCG7	672 aa		12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	NAP1L4	Q99733	375 aa	Known RBP	12.04	□□□□□ -0.48
CDK11A-222	ENST00000498810	ADAMTS3	O15072	1205 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	HBP1	O60381	514 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	LARGE1	O95461	756 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	CCNE2	O96020	404 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	CXCL10	P02778	98 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	CA3	P07451	260 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	IGFBP4	P22692	258 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	HOXC8	P31273	242 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	JAK3	P52333	1124 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	GNL2	Q13823	731 aa	Known RBP	12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	ME3	Q16798	604 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	IER5	Q5VY09	327 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	RUFY4	Q6ZNE9	571 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	PIK3AP1	Q6ZUJ8	805 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	MIER3	Q7Z3K6	550 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	HERC6	Q8IVU3	1022 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	SLC17A8	Q8NDX2	589 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	MAFA	Q8NHW3	353 aa	Predicted RBP	12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	PHOSPHO2	Q8TCD6	241 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	TRAPPC12	Q8WVT3	735 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	DNAJB3	Q8WWF6	145 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	APBB2	Q92870	758 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	FAM167A	Q96KS9	214 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	PHF20	Q9BVI0	1012 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	IFIH1	Q9BYX4	1025 aa	Known RBP	12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	PRDM12	Q9H4Q4	367 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	GABBR1	Q9UBS5	961 aa		12.03	□□□□□ -0.48
CDK11A-222	ENST00000498810	DDX25	Q9UHL0	483 aa	Known RBP	12.03	□□□□□ -0.48

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