RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 KDM2BQ8NHM5 1336 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 GOLGA6L22H0YM25 854 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 RASGRP1O95267 797 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 RIN1Q13671 783 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 SAFB2Q14151 953 aaKnown RBP eCLIP6.16□□□□□ -1.42
SMC4-227ENST00000497984 TRIM61Q5EBN2 209 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 CATSPEREQ5SY80 951 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 SGMS1Q86VZ5 419 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 TMPRSS6Q8IU80 811 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 HIPK4Q8NE63 616 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 LARP4BQ92615 738 aaKnown RBP6.16□□□□□ -1.42
SMC4-227ENST00000497984 TMEM176AQ96HP8 235 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 SCLYQ96I15 445 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 SIRPGQ9P1W8 387 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 FAM184BQ9ULE4 1060 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 GIT1Q9Y2X7 761 aa6.16□□□□□ -1.42
SMC4-227ENST00000497984 CTDP1Q9Y5B0 961 aaPredicted RBP6.16□□□□□ -1.42
SMC4-227ENST00000497984 EFCAB14O75071 495 aa6.15□□□□□ -1.42
SMC4-227ENST00000497984 KCNA6P17658 529 aa6.15□□□□□ -1.42
SMC4-227ENST00000497984 APEX1P27695 318 aaKnown RBP6.15□□□□□ -1.42
SMC4-227ENST00000497984 INHBCP55103 352 aa6.15□□□□□ -1.42
SMC4-227ENST00000497984 SERINC3Q13530 473 aa6.15□□□□□ -1.42
SMC4-227ENST00000497984 RASA3Q14644 834 aa6.15□□□□□ -1.42
SMC4-227ENST00000497984 ZNF483Q8TF39 744 aaPredicted RBP6.15□□□□□ -1.42
SMC4-227ENST00000497984 FOXRED1Q96CU9 486 aaPredicted RBP6.15□□□□□ -1.42
SMC4-227ENST00000497984 CCDC9Q9Y3X0 531 aaKnown RBP6.15□□□□□ -1.42
SMC4-227ENST00000497984 CAPN14A8MX76 684 aa6.14□□□□□ -1.43
SMC4-227ENST00000497984 HHEXQ03014 270 aa6.14□□□□□ -1.43
SMC4-227ENST00000497984 ADAM15Q13444 863 aa6.14□□□□□ -1.43
SMC4-227ENST00000497984 NAALADL2Q58DX5 795 aa6.14□□□□□ -1.43
SMC4-227ENST00000497984 ZC3H12BQ5HYM0 836 aaKnown RBP6.14□□□□□ -1.43
SMC4-227ENST00000497984 ABHD17CQ6PCB6 329 aa6.14□□□□□ -1.43
SMC4-227ENST00000497984 RTN4RL1Q86UN2 441 aaPredicted RBP6.14□□□□□ -1.43
SMC4-227ENST00000497984 CALML6Q8TD86 181 aa6.14□□□□□ -1.43
SMC4-227ENST00000497984 RABGGTAQ92696 567 aa6.14□□□□□ -1.43
SMC4-227ENST00000497984 VWA7Q9Y334 891 aa6.14□□□□□ -1.43
SMC4-227ENST00000497984 SH3BP1Q9Y3L3 701 aa6.14□□□□□ -1.43
SMC4-227ENST00000497984 A0A087X1B8 175 aa6.13□□□□□ -1.43
SMC4-227ENST00000497984 SLC12A8A0AV02 714 aa6.13□□□□□ -1.43
SMC4-227ENST00000497984 FAM221BA6H8Z2 402 aa6.13□□□□□ -1.43
SMC4-227ENST00000497984 ADH4P08319 380 aa6.13□□□□□ -1.43
SMC4-227ENST00000497984 STAT3P40763 770 aa6.13□□□□□ -1.43
SMC4-227ENST00000497984 ADCY7P51828 1080 aa6.13□□□□□ -1.43
SMC4-227ENST00000497984 ZC3H6P61129 1189 aaKnown RBP6.13□□□□□ -1.43
SMC4-227ENST00000497984 ALDH6A1Q02252 535 aaKnown RBP6.13□□□□□ -1.43
SMC4-227ENST00000497984 RRP1BQ14684 758 aaKnown RBP6.13□□□□□ -1.43
SMC4-227ENST00000497984 TMEM132BQ14DG7 1078 aa6.13□□□□□ -1.43
SMC4-227ENST00000497984 PCSK4Q6UW60 755 aa6.13□□□□□ -1.43
SMC4-227ENST00000497984 ZNF627Q7L945 461 aa6.13□□□□□ -1.43
SMC4-227ENST00000497984 THEMISQ8N1K5 641 aaPredicted RBP6.13□□□□□ -1.43
SMC4-227ENST00000497984 MAGEB10Q96LZ2 347 aaPredicted RBP6.13□□□□□ -1.43
SMC4-227ENST00000497984 MPHOSPH9Q99550 1183 aa6.13□□□□□ -1.43
SMC4-227ENST00000497984 CYP27B1O15528 508 aa6.12□□□□□ -1.43
SMC4-227ENST00000497984 ZBTB48P10074 688 aaPredicted RBP6.12□□□□□ -1.43
SMC4-227ENST00000497984 MAKP20794 623 aa6.12□□□□□ -1.43
SMC4-227ENST00000497984 ADAM8P78325 824 aa6.12□□□□□ -1.43
SMC4-227ENST00000497984 ACAP1Q15027 740 aa6.12□□□□□ -1.43
SMC4-227ENST00000497984 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
SMC4-227ENST00000497984 Q6ZPA2 131 aa6.12□□□□□ -1.43
SMC4-227ENST00000497984 TCRBV16S1A1N1A0A5B0 115 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 KCNQ2O43526 872 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 RBM25P49756 843 aaKnown RBP6.11□□□□□ -1.43
SMC4-227ENST00000497984 ATP2C1P98194 919 aaPredicted RBP6.11□□□□□ -1.43
SMC4-227ENST00000497984 IRF9Q00978 393 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 MAP3K12Q12852 859 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 KLHDC10Q6PID8 442 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 OTOP1Q7RTM1 612 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 LRP10Q7Z4F1 713 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 BRAPQ7Z569 592 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 FGD2Q7Z6J4 655 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 JMYQ8N9B5 988 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 LPPQ93052 612 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 DEPDC7Q96QD5 511 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 FOXB1Q99853 325 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 SLC2A4RGQ9NR83 387 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 PARPBPQ9NWS1 579 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 SFMBT1Q9UHJ3 866 aa6.11□□□□□ -1.43
SMC4-227ENST00000497984 A0A1W2PRX2 142 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 C2orf78A6NCI8 922 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 HIP1RO75146 1068 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 NPTXRO95502 500 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 PEX11BO96011 259 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 KRT4P19013 534 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 ATP2B1P20020 1258 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 SCNN1GP51170 649 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 SLC25A3Q00325 362 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 TMEM177Q53S58 311 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 CC2D1AQ6P1N0 951 aaPredicted RBP6.1□□□□□ -1.43
SMC4-227ENST00000497984 Q6ZRM9 215 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 ZNF575Q86XF7 245 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 IGSF22Q8N9C0 903 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 ERCC4Q92889 916 aaPredicted RBP6.1□□□□□ -1.43
SMC4-227ENST00000497984 CLIP3Q96DZ5 547 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 GPHA2Q96T91 129 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 TANGO6Q9C0B7 1094 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 SLC6A15Q9H2J7 730 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 SNTG2Q9NY99 539 aa6.1□□□□□ -1.43
SMC4-227ENST00000497984 PPP1R1BQ9UD71 204 aaPredicted RBP6.1□□□□□ -1.43
SMC4-227ENST00000497984 ANTXR2P58335 489 aa6.09□□□□□ -1.43
SMC4-227ENST00000497984 CRHR2Q13324 411 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms