RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PRAMEF22A3QJZ6 481 aa4.72□□□□□ -1.65
PSPC1-205ENST00000497722 PMS2P1A4D2B8 440 aa4.72□□□□□ -1.65
PSPC1-205ENST00000497722 ASMTLO95671 621 aa4.72□□□□□ -1.65
PSPC1-205ENST00000497722 COMTP21964 271 aa4.72□□□□□ -1.65
PSPC1-205ENST00000497722 CC2D1AQ6P1N0 951 aaPredicted RBP4.72□□□□□ -1.65
PSPC1-205ENST00000497722 USP30Q70CQ3 517 aa4.72□□□□□ -1.65
PSPC1-205ENST00000497722 GIMAP8Q8ND71 665 aaPredicted RBP4.72□□□□□ -1.65
PSPC1-205ENST00000497722 PLA2G12BQ9BX93 195 aa4.72□□□□□ -1.65
PSPC1-205ENST00000497722 NR2E1Q9Y466 385 aa4.72□□□□□ -1.65
PSPC1-205ENST00000497722 TRAF5O00463 557 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 RAPGEF3O95398 923 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 AMHP03971 560 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 MRE11P49959 708 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 IRF9Q00978 393 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 ALDH6A1Q02252 535 aaKnown RBP4.71□□□□□ -1.66
PSPC1-205ENST00000497722 PRKD1Q15139 912 aaPredicted RBP4.71□□□□□ -1.66
PSPC1-205ENST00000497722 TCEA2Q15560 299 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 ZNF568Q3ZCX4 644 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 FNDC3BQ53EP0 1204 aaKnown RBP4.71□□□□□ -1.66
PSPC1-205ENST00000497722 MIIPQ5JXC2 388 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 GRAMD4Q6IC98 578 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 ZCCHC8Q6NZY4 707 aaKnown RBP4.71□□□□□ -1.66
PSPC1-205ENST00000497722 GIMAP6Q6P9H5 292 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 POLNQ7Z5Q5 900 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 JAZF1Q86VZ6 243 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 GPR135Q8IZ08 494 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 ZNF503Q96F45 646 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 RNPC3Q96LT9 517 aaKnown RBP4.71□□□□□ -1.66
PSPC1-205ENST00000497722 BOCQ9BWV1 1114 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 OR10A2Q9H208 303 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 VPS11Q9H270 941 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 KANSL2Q9H9L4 492 aa4.71□□□□□ -1.66
PSPC1-205ENST00000497722 CDC14BO60729 498 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 DNAJC8O75937 253 aaPredicted RBP4.7□□□□□ -1.66
PSPC1-205ENST00000497722 GLRX3O76003 335 aaKnown RBP4.7□□□□□ -1.66
PSPC1-205ENST00000497722 FNTBP49356 437 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 FOXL1Q12952 345 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 TMEM132BQ14DG7 1078 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 HS1BP3Q53T59 392 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 SDE2Q6IQ49 451 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 RNF207Q6ZRF8 634 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 OTOP2Q7RTS6 562 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 FILIP1Q7Z7B0 1213 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 C2orf69Q8N8R5 385 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 ADOQ96SZ5 270 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 FOXB1Q99853 325 aa4.7□□□□□ -1.66
PSPC1-205ENST00000497722 AGO3Q9H9G7 860 aaKnown RBP4.7□□□□□ -1.66
PSPC1-205ENST00000497722 CTDP1Q9Y5B0 961 aaPredicted RBP4.7□□□□□ -1.66
PSPC1-205ENST00000497722 ACO1P21399 889 aaKnown RBP4.69□□□□□ -1.66
PSPC1-205ENST00000497722 APEX1P27695 318 aaKnown RBP4.69□□□□□ -1.66
PSPC1-205ENST00000497722 RPS19P39019 145 aaKnown RBP4.69□□□□□ -1.66
PSPC1-205ENST00000497722 STAT5BP51692 787 aa4.69□□□□□ -1.66
PSPC1-205ENST00000497722 FOXE3Q13461 319 aa4.69□□□□□ -1.66
PSPC1-205ENST00000497722 ARHGAP44Q17R89 818 aa4.69□□□□□ -1.66
PSPC1-205ENST00000497722 C21orf62-AS1Q17RA5 79 aa4.69□□□□□ -1.66
PSPC1-205ENST00000497722 CREB3L3Q68CJ9 461 aa4.69□□□□□ -1.66
PSPC1-205ENST00000497722 C16orf86Q6ZW13 317 aa4.69□□□□□ -1.66
PSPC1-205ENST00000497722 SYNPOQ8N3V7 929 aa4.69□□□□□ -1.66
PSPC1-205ENST00000497722 HIPK4Q8NE63 616 aa4.69□□□□□ -1.66
PSPC1-205ENST00000497722 C16orf92Q96LL3 132 aa4.69□□□□□ -1.66
PSPC1-205ENST00000497722 TMEM260Q9NX78 707 aa4.69□□□□□ -1.66
PSPC1-205ENST00000497722 PUF60Q9UHX1 559 aaKnown RBP4.69□□□□□ -1.66
PSPC1-205ENST00000497722 M0R2C6 588 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 OPA1O60313 960 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 PRLP01236 227 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 ASLP04424 464 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 SDSP20132 328 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 IGFALSP35858 605 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 FLT3P36888 993 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 ADAM8P78325 824 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 SAFB2Q14151 953 aaKnown RBP eCLIP4.68□□□□□ -1.66
PSPC1-205ENST00000497722 ZNF460Q14592 562 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 IGFL4Q6B9Z1 124 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 CHST14Q8NCH0 376 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 CALML6Q8TD86 181 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 EXTL1Q92935 676 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 NKD2Q969F2 451 aaPredicted RBP4.68□□□□□ -1.66
PSPC1-205ENST00000497722 OR14A2Q96R54 314 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 HAPLN2Q9GZV7 340 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 NELFAQ9H3P2 528 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 PLA2G3Q9NZ20 509 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 SAMD15Q9P1V8 674 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 VWA7Q9Y334 891 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 TNPO3Q9Y5L0 923 aaKnown RBP4.68□□□□□ -1.66
PSPC1-205ENST00000497722 SHROOM4Q9ULL8 1493 aa4.68□□□□□ -1.66
PSPC1-205ENST00000497722 FAM83GA6ND36 823 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 B4E1Z4 1266 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 PPP1R12AO14974 1030 aaPredicted RBP4.67□□□□□ -1.66
PSPC1-205ENST00000497722 SLC26A4O43511 780 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 HIP1RO75146 1068 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 RFPL3O75679 317 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 ADCY7P51828 1080 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 ANTXR2P58335 489 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 SMN1Q16637 294 aaKnown RBP4.67□□□□□ -1.66
PSPC1-205ENST00000497722 DDX53Q86TM3 631 aaKnown RBP4.67□□□□□ -1.66
PSPC1-205ENST00000497722 RTKN2Q8IZC4 609 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 ZNF808Q8N4W9 903 aaPredicted RBP4.67□□□□□ -1.66
PSPC1-205ENST00000497722 OR14K1Q8NGZ2 314 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 IL17DQ8TAD2 202 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 FEZ1Q99689 392 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms