RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 DDX12PQ92771 950 aa12.17□□□□□ -0.46
CCDC142-209ENST00000497232 CDK5RAP3Q96JB5 506 aa12.17□□□□□ -0.46
CCDC142-209ENST00000497232 NRBP2Q9NSY0 501 aa12.17□□□□□ -0.46
CCDC142-209ENST00000497232 KCND2Q9NZV8 630 aa12.17□□□□□ -0.46
CCDC142-209ENST00000497232 HDAC6Q9UBN7 1215 aa12.17□□□□□ -0.46
CCDC142-209ENST00000497232 SEPT9Q9UHD8 586 aaPredicted RBP12.17□□□□□ -0.46
CCDC142-209ENST00000497232 ZNF215Q9UL58 517 aaPredicted RBP12.17□□□□□ -0.46
CCDC142-209ENST00000497232 PCDHA2Q9Y5H9 948 aa12.17□□□□□ -0.46
CCDC142-209ENST00000497232 TRIP12Q14669 1992 aaPredicted RBP12.17□□□□□ -0.46
CCDC142-209ENST00000497232 NRCAMQ92823 1304 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 RSPH10B2B2RC85 870 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 KINO60870 393 aaKnown RBP12.16□□□□□ -0.46
CCDC142-209ENST00000497232 MYL1P05976 194 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 RSPH10BP0C881 870 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 CAPN2P17655 700 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 BMP6P22004 513 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 ZNF200P98182 395 aaPredicted RBP12.16□□□□□ -0.46
CCDC142-209ENST00000497232 DRP2Q13474 957 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 PNOCQ13519 176 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 POSTNQ15063 836 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 GRIK4Q16099 956 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 MTERF2Q49AM1 385 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 COL13A1Q5TAT6 717 aaPredicted RBP12.16□□□□□ -0.46
CCDC142-209ENST00000497232 NFRKBQ6P4R8 1299 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 MTHFD1LQ6UB35 978 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 GPBP1Q86WP2 473 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 ERCC4Q92889 916 aaPredicted RBP12.16□□□□□ -0.46
CCDC142-209ENST00000497232 KCNN1Q92952 543 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 CEP170P1Q96L14 293 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 KATNAL1Q9BW62 490 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 BLZF1Q9H2G9 400 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 SETD4Q9NVD3 440 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 GTF2IRD1Q9UHL9 959 aa12.16□□□□□ -0.46
CCDC142-209ENST00000497232 MKI67P46013 3256 aaKnown RBP12.16□□□□□ -0.46
CCDC142-209ENST00000497232 ARHGEF35A5YM69 484 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 RRN3P2A6NIE6 340 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 DGAT1O75907 488 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 KLRC1P26715 233 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 ARL2P36404 184 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 RFC5P40937 340 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 AFMP43652 599 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 SOX10P56693 466 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 PPFIA1Q13136 1202 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 ITGA7Q13683 1181 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 SNX17Q15036 470 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 CAMK4Q16566 473 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 SKOR2Q2VWA4 1001 aaPredicted RBP12.15□□□□□ -0.46
CCDC142-209ENST00000497232 GDF6Q6KF10 455 aaPredicted RBP12.15□□□□□ -0.46
CCDC142-209ENST00000497232 KANK3Q6NY19 840 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 TRMT1LQ7Z2T5 733 aaKnown RBP12.15□□□□□ -0.46
CCDC142-209ENST00000497232 CKAP2LQ8IYA6 745 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 CEP57L1Q8IYX8 460 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 ANKLE1Q8NAG6 615 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 DIS3LQ8TF46 1054 aaKnown RBP12.15□□□□□ -0.46
CCDC142-209ENST00000497232 BSNDQ8WZ55 320 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 WNT8BQ93098 351 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 REEP2Q9BRK0 252 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 POLD4Q9HCU8 107 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 GPRC5CQ9NQ84 441 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 TRPC6Q9Y210 931 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 PCDHA5Q9Y5H7 936 aa12.15□□□□□ -0.46
CCDC142-209ENST00000497232 EVPLQ92817 2033 aa12.15□□□□□ -0.47
CCDC142-209ENST00000497232 TREHO43280 583 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 USO1O60763 962 aaKnown RBP12.14□□□□□ -0.47
CCDC142-209ENST00000497232 RTP1P59025 263 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 PTPN11Q06124 597 aaPredicted RBP12.14□□□□□ -0.47
CCDC142-209ENST00000497232 DHX8Q14562 1220 aaKnown RBP12.14□□□□□ -0.47
CCDC142-209ENST00000497232 EMC2Q15006 297 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 TRIM71Q2Q1W2 868 aaKnown RBP12.14□□□□□ -0.47
CCDC142-209ENST00000497232 CCDC183Q5T5S1 534 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 C1orf53Q5VUE5 145 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 CAVIN1Q6NZI2 390 aaKnown RBP12.14□□□□□ -0.47
CCDC142-209ENST00000497232 RUFY4Q6ZNE9 571 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 UNC13DQ70J99 1090 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 RPAINQ86UA6 219 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 KIAA0319LQ8IZA0 1049 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 RASSF8Q8NHQ8 419 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 FUCA2Q9BTY2 467 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 STRA6Q9BX79 667 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 FGFBP2Q9BYJ0 223 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 NUP62CLQ9H1M0 184 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 ODF2LQ9ULJ1 636 aa12.14□□□□□ -0.47
CCDC142-209ENST00000497232 KAT6AQ92794 2004 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 SMIM35A0A1B0GVV1 85 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 PVALEFA0A1B0GWK0 134 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 ARVCFO00192 962 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 MAGEB2O15479 319 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 HIP1RO75146 1068 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 RHOBTB3O94955 611 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 CD4P01730 458 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 GLRA2P23416 452 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 AMPD3Q01432 767 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 KCNB1Q14721 858 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 DYMQ7RTS9 669 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 SERINC5Q86VE9 423 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 ASAP3Q8TDY4 903 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 DHX38Q92620 1227 aaKnown RBP12.13□□□□□ -0.47
CCDC142-209ENST00000497232 GLT1D1Q96MS3 346 aa12.13□□□□□ -0.47
CCDC142-209ENST00000497232 NTPCRQ9BSD7 190 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms