RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 IFNAR2P48551 515 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 RASSF2P50749 326 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 TRIM28Q13263 835 aaKnown RBP14.06□□□□□ -0.16
VEGFA-215ENST00000497139 GALNT17Q6IS24 598 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 DPY19L2Q6NUT2 758 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 IFNL2Q8IZJ0 200 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 MAGEB6Q8N7X4 407 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 CKAP2Q8WWK9 683 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 RAPGEF4Q8WZA2 1011 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 UTP4Q969X6 686 aaKnown RBP14.06□□□□□ -0.16
VEGFA-215ENST00000497139 DCLRE1BQ9H816 532 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 DLGAP2Q9P1A6 1054 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 MTRF1LQ9UGC7 380 aaKnown RBP14.06□□□□□ -0.16
VEGFA-215ENST00000497139 PHF24Q9UPV7 400 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 CCDC88AQ3V6T2 1871 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 NBPF26B4DH59 902 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 RASGRF2O14827 1237 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 GNA14O95837 355 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 PDHA1P08559 390 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 SKIP12755 728 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 ITGA4P13612 1032 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 DR1Q01658 176 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 UNC13DQ70J99 1090 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 VGLL2Q8N8G2 317 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 TTLL11Q8NHH1 800 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 HES6Q96HZ4 224 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 NUDCD1Q96RS6 583 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 PACSIN1Q9BY11 444 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 PCMTD2Q9NV79 361 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 STOML1Q9UBI4 398 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 ADAMTS1Q9UHI8 967 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 PNMA3Q9UL41 463 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 TMCO1Q9UM00 188 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 PCDHA4Q9UN74 947 aa14.06□□□□□ -0.16
VEGFA-215ENST00000497139 TLDC2A0PJX2 215 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 ZSCAN9O15535 394 aaPredicted RBP14.05□□□□□ -0.16
VEGFA-215ENST00000497139 ECE2O60344 883 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 PTDSS1P48651 473 aaKnown RBP14.05□□□□□ -0.16
VEGFA-215ENST00000497139 OPTNQ96CV9 577 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 PLEKHG4BQ96PX9 1271 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 SUDS3Q9H7L9 328 aaPredicted RBP14.05□□□□□ -0.16
VEGFA-215ENST00000497139 GOPCQ9HD26 462 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 ATXN10Q9UBB4 475 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 PCDH11XQ9BZA7 1347 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 hCG_1642624A0A1W2PR95 340 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 POLR2FP61218 127 aaKnown RBP14.05□□□□□ -0.16
VEGFA-215ENST00000497139 OCRLQ01968 901 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 AUHQ13825 339 aaKnown RBP14.05□□□□□ -0.16
VEGFA-215ENST00000497139 SLC29A2Q14542 456 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 SETDB1Q15047 1291 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 MUM1Q2TAK8 710 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 DAAM2Q86T65 1068 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 LCA5Q86VQ0 697 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 DAGLBQ8NCG7 672 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 LZICQ8WZA0 190 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 NCSTNQ92542 709 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 ZNF333Q96JL9 665 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 LSM14BQ9BX40 385 aaKnown RBP14.05□□□□□ -0.16
VEGFA-215ENST00000497139 TANGO6Q9C0B7 1094 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 COL4A3BPQ9Y5P4 624 aa14.05□□□□□ -0.16
VEGFA-215ENST00000497139 PP2D1A8MPX8 630 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 NVLO15381 856 aaKnown RBP14.04□□□□□ -0.16
VEGFA-215ENST00000497139 HNRNPCL1O60812 293 aaKnown RBP14.04□□□□□ -0.16
VEGFA-215ENST00000497139 VHLP40337 213 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 RFC5P40937 340 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 MARSP56192 900 aaKnown RBP14.04□□□□□ -0.16
VEGFA-215ENST00000497139 POLE2P56282 527 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 RAPGEF1Q13905 1077 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 KIAA1755Q5JYT7 1200 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 PTPRN2Q92932 1015 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 CEP63Q96MT8 703 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 CELF4Q9BZC1 486 aaKnown RBP14.04□□□□□ -0.16
VEGFA-215ENST00000497139 STK17AQ9UEE5 414 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 USP20Q9Y2K6 914 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 RPTORQ8N122 1335 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 CCDC194A0A1B0GVG4 234 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 MAGEA13PA6NCF6 341 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 MTFR1Q15390 333 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 GSTA3Q16772 222 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 INTS8Q75QN2 995 aaKnown RBP14.04□□□□□ -0.16
VEGFA-215ENST00000497139 SRBD1Q8N5C6 995 aaKnown RBP14.04□□□□□ -0.16
VEGFA-215ENST00000497139 SPATA5Q8NB90 893 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 LRRC15Q8TF66 581 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 AZIN2Q96A70 460 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 SERPINB12Q96P63 405 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 LRRC27Q9C0I9 530 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 ZMYND8Q9ULU4 1186 aaPredicted RBP14.04□□□□□ -0.16
VEGFA-215ENST00000497139 GMEB1Q9Y692 573 aa14.04□□□□□ -0.16
VEGFA-215ENST00000497139 TRAFD1O14545 582 aaPredicted RBP14.03□□□□□ -0.16
VEGFA-215ENST00000497139 MAP3K13O43283 966 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 AFPP02771 609 aaKnown RBP14.03□□□□□ -0.16
VEGFA-215ENST00000497139 HSPA6P17066 643 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 MTA1Q13330 715 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 PABPC1LQ4VXU2 614 aaKnown RBP14.03□□□□□ -0.16
VEGFA-215ENST00000497139 ZDHHC24Q6UX98 284 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 LDHAL6AQ6ZMR3 332 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 NT5DC3Q86UY8 548 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 FAM13CQ8NE31 585 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 TRIM51Q9BSJ1 452 aa14.03□□□□□ -0.16
VEGFA-215ENST00000497139 LARSQ9P2J5 1176 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms