RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 NBR1Q14596 966 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 EMC2Q15006 297 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 SPOUT1Q5T280 376 aaKnown RBP9.53□□□□□ -0.88
U2AF1-212ENST00000496462 SLFN12LQ6IEE8 588 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 CYP2W1Q8TAV3 490 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 GDPD2Q9HCC8 539 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 PHF24Q9UPV7 400 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 BAZ2BQ9UIF8 2168 aaKnown RBP9.53□□□□□ -0.88
U2AF1-212ENST00000496462 A0A1B0GVL5 298 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 ARHGEF37A1IGU5 675 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 K7ENM7 598 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 CALUO43852 315 aaPredicted RBP9.53□□□□□ -0.88
U2AF1-212ENST00000496462 KIF4AO95239 1232 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 PLCG1P19174 1290 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 PSMD2Q13200 908 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 FILIP1LQ4L180 1135 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 RAD54LQ92698 747 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 RPS6KC1Q96S38 1066 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 UPF3AQ9H1J1 476 aaKnown RBP9.53□□□□□ -0.88
U2AF1-212ENST00000496462 DOCK3Q8IZD9 2030 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 LYPLA2O95372 231 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 TPM1P09493 284 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 MCM4P33991 863 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 PAK2Q13177 524 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 PTK7Q13308 1070 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 CCDC183Q5T5S1 534 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 CCDC62Q6P9F0 684 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 ABHD15Q6UXT9 468 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 ZNF410Q86VK4 478 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 RHPN2Q8IUC4 686 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 PIGOQ8TEQ8 1089 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 TIGD1Q96MW7 591 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 POLR3FQ9H1D9 316 aaPredicted RBP9.52□□□□□ -0.88
U2AF1-212ENST00000496462 PANK4Q9NVE7 773 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 RGL1Q9NZL6 768 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 TRPV2Q9Y5S1 764 aa9.52□□□□□ -0.88
U2AF1-212ENST00000496462 MORC2Q9Y6X9 1032 aaPredicted RBP9.52□□□□□ -0.88
U2AF1-212ENST00000496462 SMTNL1A8MU46 457 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 RSPH10B2B2RC85 870 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 OPLAHO14841 1288 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 ZNF202O95125 648 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 CAVIN2O95810 425 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 SLFN14P0C7P3 912 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 RSPH10BP0C881 870 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 SRGAP2CP0DJJ0 459 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 CYP11B2P19099 503 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 RFC2P35250 354 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 RTP1P59025 263 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 ST3GAL1Q11201 340 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 AFAP1L1Q8TED9 768 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 ACCSQ96QU6 501 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 TMEM60Q9H2L4 133 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 SETD4Q9NVD3 440 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 PRMT7Q9NVM4 692 aaPredicted RBP9.52□□□□□ -0.89
U2AF1-212ENST00000496462 HTTP42858 3142 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 GCNT3O95395 438 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 PFKFB1P16118 471 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 COL9A3Q14050 684 aaPredicted RBP9.52□□□□□ -0.89
U2AF1-212ENST00000496462 DYMQ7RTS9 669 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 ETNPPLQ8TBG4 499 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 MTMR9Q96QG7 549 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 CCDC94Q9BW85 323 aaPredicted RBP9.52□□□□□ -0.89
U2AF1-212ENST00000496462 OGDHLQ9ULD0 1010 aa9.52□□□□□ -0.89
U2AF1-212ENST00000496462 IGLV3-22A0A075B6J6 115 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 SMIM35A0A1B0GVV1 85 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 A0A1W2PQ45 241 aaPredicted RBP9.51□□□□□ -0.89
U2AF1-212ENST00000496462 A0A1W2PQY0 241 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 ATP9AO75110 1047 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 CLTBP09497 229 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 HSDL1Q3SXM5 330 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 SPECC1Q5M775 1068 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 FAM26FQ5R3K3 315 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 MAP3K21Q5TCX8 1036 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 POTEGQ6S5H5 508 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 SRGAP1Q7Z6B7 1085 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 URGCPQ8TCY9 931 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 TNFRSF25Q93038 417 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 CLIC6Q96NY7 704 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 HIPK3Q9H422 1215 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.51□□□□□ -0.89
U2AF1-212ENST00000496462 PFKMP08237 780 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 SURF1Q15526 300 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 FTHL17Q9BXU8 183 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 TOPORSQ9NS56 1045 aaPredicted RBP9.51□□□□□ -0.89
U2AF1-212ENST00000496462 FLRT1Q9NZU1 646 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 HDAC6Q9UBN7 1215 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 FRMD4BQ9Y2L6 1034 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 PVALEFA0A1B0GWK0 134 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 LGR5O75473 907 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 PURAQ00577 322 aaKnown RBP9.51□□□□□ -0.89
U2AF1-212ENST00000496462 ITGB3BPQ13352 177 aaPredicted RBP9.51□□□□□ -0.89
U2AF1-212ENST00000496462 PLCB4Q15147 1175 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 TWF2Q6IBS0 349 aaKnown RBP9.51□□□□□ -0.89
U2AF1-212ENST00000496462 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 IMPG2Q9BZV3 1241 aa9.51□□□□□ -0.89
U2AF1-212ENST00000496462 N4BP3O15049 544 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 KIAA0391O15091 583 aaKnown RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 F2P00734 622 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 CTSHP09668 335 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms