RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 LMF1Q96S06 567 aa7.51□□□□□ -1.21
NCKAP1-208ENST00000495619 ELF4Q99607 663 aaPredicted RBP7.51□□□□□ -1.21
NCKAP1-208ENST00000495619 MTFR1LQ9H019 292 aa7.51□□□□□ -1.21
NCKAP1-208ENST00000495619 THG1LQ9NWX6 298 aaKnown RBP7.51□□□□□ -1.21
NCKAP1-208ENST00000495619 SAE1Q9UBE0 346 aaPredicted RBP7.51□□□□□ -1.21
NCKAP1-208ENST00000495619 PDE8AO60658 829 aa7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 PRLP01236 227 aa7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 ZNF888P0CJ79 500 aaPredicted RBP7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 BCAR1P56945 870 aa7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 IL2P60568 153 aa7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 DSG1Q02413 1049 aa7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 PCBP1Q15365 356 aaKnown RBP eCLIP7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 SKOR2Q2VWA4 1001 aaPredicted RBP7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 PRRT2Q7Z6L0 340 aaPredicted RBP7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 LEO1Q8WVC0 666 aaPredicted RBP7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 TMX1Q9H3N1 280 aa7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 VWA7Q9Y334 891 aa7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 NR2E1Q9Y466 385 aa7.5□□□□□ -1.21
NCKAP1-208ENST00000495619 H2AFYO75367 372 aaKnown RBP7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 PTX3P26022 381 aaPredicted RBP7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 DGKDQ16760 1214 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 LCE4AQ5TA78 99 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 USP30Q70CQ3 517 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 TTC9BQ8N6N2 239 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 GIMAP8Q8ND71 665 aaPredicted RBP7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 CHTF18Q8WVB6 975 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 RBM15Q96T37 977 aaKnown RBP eCLIP7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 OR10A2Q9H208 303 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 MSL2Q9HCI7 577 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 SMPD4Q9NXE4 827 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 KCMF1Q9P0J7 381 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 PPP4R1LQ9P1A2 415 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 USP36Q9P275 1121 aaKnown RBP7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 PUF60Q9UHX1 559 aaKnown RBP7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 FAM184BQ9ULE4 1060 aa7.49□□□□□ -1.21
NCKAP1-208ENST00000495619 ZNF891A8MT65 544 aaPredicted RBP7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 RAB11FIP3O75154 756 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 APOL3O95236 402 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 LSP1P33241 339 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 RGS3P49796 1198 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 ADCY2Q08462 1091 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 LCE1DQ5T752 114 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 TRIM68Q6AZZ1 485 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 DDX46Q7L014 1031 aaKnown RBP7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 LIMS2Q7Z4I7 341 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 FILIP1Q7Z7B0 1213 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 SMC1BQ8NDV3 1235 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 USP7Q93009 1102 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 LPPQ93052 612 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 GFM2Q969S9 779 aaKnown RBP7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 BORCS6Q96GS4 357 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 GPR101Q96P66 508 aaPredicted RBP7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 KCNG1Q9UIX4 513 aa7.48□□□□□ -1.21
NCKAP1-208ENST00000495619 GSG1L2A8MUP6 293 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 ARHGAP6O43182 974 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 CNOT4O95628 575 aaKnown RBP7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 SOX5P35711 763 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 LSSP48449 732 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 MRE11P49959 708 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 LRRC32Q14392 662 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 PCOLCEQ15113 449 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 HS1BP3Q53T59 392 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 CT47A1Q5JQC4 288 aaPredicted RBP7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 GPR158Q5T848 1215 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 AGBL4Q5VU57 503 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 KLHDC10Q6PID8 442 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 NEIL1Q96FI4 390 aaPredicted RBP7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 LRRC37BQ96QE4 947 aa7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 C12orf65Q9H3J6 166 aaKnown RBP7.47□□□□□ -1.21
NCKAP1-208ENST00000495619 A0A087X0B3 334 aa7.46□□□□□ -1.22
NCKAP1-208ENST00000495619 CPEP16870 476 aa7.46□□□□□ -1.22
NCKAP1-208ENST00000495619 MAGEA10P43363 369 aaPredicted RBP7.46□□□□□ -1.22
NCKAP1-208ENST00000495619 EFEMP1Q12805 493 aa7.46□□□□□ -1.22
NCKAP1-208ENST00000495619 NFYCQ13952 458 aa7.46□□□□□ -1.22
NCKAP1-208ENST00000495619 DHCR24Q15392 516 aa7.46□□□□□ -1.22
NCKAP1-208ENST00000495619 ESPNLQ6ZVH7 1005 aa7.46□□□□□ -1.22
NCKAP1-208ENST00000495619 H2AFY2Q9P0M6 372 aaPredicted RBP7.46□□□□□ -1.22
NCKAP1-208ENST00000495619 PTPN22Q9Y2R2 807 aa7.46□□□□□ -1.22
NCKAP1-208ENST00000495619 ST20-MTHFSA0A0A6YYL1 179 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 FKBP9O95302 570 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 CR2P20023 1033 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 STAT5BP51692 787 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 NOLC1Q14978 699 aaKnown RBP eCLIP7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 CREB3L3Q68CJ9 461 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 FKBP9P1Q75LS8 142 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 BMP8AQ7Z5Y6 402 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 OR5AN1Q8NGI8 311 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 RTF1Q92541 710 aaKnown RBP7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 DEF6Q9H4E7 631 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 CAAP1Q9H8G2 361 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 DENND2AQ9ULE3 1009 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 OAZ3Q9UMX2 235 aa7.45□□□□□ -1.22
NCKAP1-208ENST00000495619 FAM83GA6ND36 823 aa7.44□□□□□ -1.22
NCKAP1-208ENST00000495619 DAPK3O43293 454 aa7.44□□□□□ -1.22
NCKAP1-208ENST00000495619 CDC14BO60729 498 aa7.44□□□□□ -1.22
NCKAP1-208ENST00000495619 PRPF6O94906 941 aaKnown RBP7.44□□□□□ -1.22
NCKAP1-208ENST00000495619 ADRB1P08588 477 aa7.44□□□□□ -1.22
NCKAP1-208ENST00000495619 PHC1P78364 1004 aa7.44□□□□□ -1.22
NCKAP1-208ENST00000495619 SMAD3P84022 425 aaKnown RBP7.44□□□□□ -1.22
NCKAP1-208ENST00000495619 SEPT7Q16181 437 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms