RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 MFSD5Q6N075 450 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 CCDC73Q6ZRK6 1079 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 LRRC8DQ7L1W4 858 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 TCP11Q8WWU5 503 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 PNMA5Q96PV4 448 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 CEP89Q96ST8 783 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 BHMT2Q9H2M3 363 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 DHX33Q9H6R0 707 aaKnown RBP19.05■□□□□ 0.64
HDAC6-235ENST00000495515 ATP6V0A4Q9HBG4 840 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 IGKV6-21A0A0C4DH24 114 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 RSPH10B2B2RC85 870 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 RSPH10BP0C881 870 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 RFC2P35250 354 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 EMC2Q15006 297 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 KARSQ15046 597 aaKnown RBP19.04■□□□□ 0.64
HDAC6-235ENST00000495515 AXDND1Q5T1B0 1012 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-235ENST00000495515 RRAGBQ5VZM2 374 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 KIAA0319LQ8IZA0 1049 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 MCPH1Q8NEM0 835 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 WNT8BQ93098 351 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 ZBTB10Q96DT7 871 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 CHAMP1Q96JM3 812 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 PLIN2Q99541 437 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 MTRQ99707 1265 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 AKT3Q9Y243 479 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 ALPK3Q96L96 1907 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 MYH15Q9Y2K3 1946 aa19.04■□□□□ 0.64
HDAC6-235ENST00000495515 A0A087WWV3 80 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 E9PMD0 336 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 H0YGN5 161 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 IQCF3P0C7M6 154 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 PLCG1P19174 1290 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 CLCN3P51790 818 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 CCL23P55773 120 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 MRPS6P82932 125 aaKnown RBP19.03■□□□□ 0.64
HDAC6-235ENST00000495515 ZNF618Q5T7W0 954 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 ADALQ6DHV7 355 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 PADI6Q6TGC4 694 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 USP49Q70CQ1 688 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 LRRC71Q8N4P6 559 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 LINC01465Q8N7H1 131 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 PYM1Q9BRP8 204 aaKnown RBP19.03■□□□□ 0.64
HDAC6-235ENST00000495515 STK17AQ9UEE5 414 aa19.03■□□□□ 0.64
HDAC6-235ENST00000495515 GOLGA6L4A6NEF3 574 aa19.02■□□□□ 0.64
HDAC6-235ENST00000495515 USO1O60763 962 aaKnown RBP19.02■□□□□ 0.64
HDAC6-235ENST00000495515 SSBP05455 408 aaKnown RBP eCLIP19.02■□□□□ 0.64
HDAC6-235ENST00000495515 CTSHP09668 335 aa19.02■□□□□ 0.64
HDAC6-235ENST00000495515 FPGSQ05932 587 aa19.02■□□□□ 0.64
HDAC6-235ENST00000495515 PPIGQ13427 754 aaKnown RBP eCLIP19.02■□□□□ 0.644e-9■■□□□ 11.7
HDAC6-235ENST00000495515 FAM26DQ5JW98 314 aa19.02■□□□□ 0.64
HDAC6-235ENST00000495515 SHC4Q6S5L8 630 aa19.02■□□□□ 0.64
HDAC6-235ENST00000495515 RPUSD2Q8IZ73 545 aaKnown RBP19.02■□□□□ 0.64
HDAC6-235ENST00000495515 PSPC1Q8WXF1 523 aaKnown RBP19.02■□□□□ 0.64
HDAC6-235ENST00000495515 BADQ92934 168 aa19.02■□□□□ 0.64
HDAC6-235ENST00000495515 KCND2Q9NZV8 630 aa19.02■□□□□ 0.64
HDAC6-235ENST00000495515 SUCLA2Q9P2R7 463 aaPredicted RBP19.02■□□□□ 0.64
HDAC6-235ENST00000495515 TRPV2Q9Y5S1 764 aa19.02■□□□□ 0.64
HDAC6-235ENST00000495515 KAT6AQ92794 2004 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 UMODL1Q5DID0 1318 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 ASAP2O43150 1006 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 PLA2G4BP0C869 781 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 CYP11B2P19099 503 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 ITGB8P26012 769 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 STAT6P42226 847 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 RESP18Q5W5W9 173 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 KCNK18Q7Z418 384 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 SYT2Q8N9I0 419 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-235ENST00000495515 CELF4Q9BZC1 486 aaKnown RBP19.01■□□□□ 0.63
HDAC6-235ENST00000495515 WNT8AQ9H1J5 351 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 GDPD2Q9HCC8 539 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 BMP2KQ9NSY1 1161 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-235ENST00000495515 CDY2AQ9Y6F7 541 aa19.01■□□□□ 0.63
HDAC6-235ENST00000495515 CEP290O15078 2479 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 A0A1W2PQ27 194 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 A0A1W2PQ64 194 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 A0A1W2PQD8 194 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 PFKMP08237 780 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 CMA1P23946 247 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 MXD4Q14582 209 aaPredicted RBP19■□□□□ 0.63
HDAC6-235ENST00000495515 IQUBQ8NA54 791 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 LARP4BQ92615 738 aaKnown RBP19■□□□□ 0.63
HDAC6-235ENST00000495515 RAD54LQ92698 747 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 TMEM143Q96AN5 459 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 SCLYQ96I15 445 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 SCLT1Q96NL6 688 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 TIPINQ9BVW5 301 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 CUEDC2Q9H467 287 aa19■□□□□ 0.63
HDAC6-235ENST00000495515 CHRNA1P02708 482 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 VTNP04004 478 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 CSF2RAP15509 400 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 MAGEA10P43363 369 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-235ENST00000495515 MDM2Q00987 491 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-235ENST00000495515 TMEM62Q0P6H9 643 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 MKRN4PQ13434 485 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-235ENST00000495515 HABP4Q5JVS0 413 aaKnown RBP18.99■□□□□ 0.63
HDAC6-235ENST00000495515 RHPN2Q8IUC4 686 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 PDILTQ8N807 584 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 USP38Q8NB14 1042 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 PANK2Q9BZ23 570 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 XPNPEP1Q9NQW7 623 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms