RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 CALUO43852 315 aaPredicted RBP20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 ERCC3P19447 782 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 EDNRBP24530 442 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 UGCGQ16739 394 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 TOGARAM2Q6ZUX3 1019 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 RABGGTAQ92696 567 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 CCDC43Q96MW1 224 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 FIZ1Q96SL8 496 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 KIAA1217Q5T5P2 1943 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 PRPF6O94906 941 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 OAS2P29728 719 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 MAPK7Q13164 816 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 ADAM9Q13443 819 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 FAM178BQ8IXR5 827 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 FAM133AQ8N9E0 248 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 GTF3C2Q8WUA4 911 aaPredicted RBP20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 EPC1Q9H2F5 836 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 SLC9A2Q9UBY0 812 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 PNMA3Q9UL41 463 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 HIP1RO75146 1068 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 CCDC40Q4G0X9 1142 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 FIGNQ5HY92 759 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 ODR4Q5SWX8 454 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 ZNF720Q7Z2F6 126 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 ATP6V0A1Q93050 837 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 TXNRD2Q9NNW7 524 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 ARFGAP3Q9NP61 516 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 ABHD10Q9NUJ1 306 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 CAPN11Q9UMQ6 739 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 PSAPP07602 524 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 NR2F2P24468 414 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 SMC1AQ14683 1233 aaKnown RBP20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 DAW1Q8N136 415 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 ZNF408Q9H9D4 720 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 POLD4Q9HCU8 107 aa20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 LARSQ9P2J5 1176 aaKnown RBP20.35■□□□□ 0.85
TSPAN4-212ENST00000494815 NKRFO15226 690 aaKnown RBP eCLIP20.34■□□□□ 0.856e-6■■□□□ 11.7
TSPAN4-212ENST00000494815 MAPTP10636 758 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 RPL13P26373 211 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 KRT9P35527 623 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 GOLGA1Q92805 767 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 TTYH3Q9C0H2 523 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 BCAS3Q9H6U6 928 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 LUC7L2Q9Y383 392 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 PCDHB13Q9Y5F0 798 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 TTC26A0AVF1 554 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 SOWAHBA6NEL2 793 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 CHRM1P11229 460 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 NMT1P30419 496 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 NFIL3Q16649 462 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 TRIM59Q8IWR1 403 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 MPHOSPH6Q99547 160 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 PARD6BQ9BYG5 372 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 MROH8Q9H579 483 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 SLC45A1Q9Y2W3 748 aa20.34■□□□□ 0.85
TSPAN4-212ENST00000494815 TRIM21P19474 475 aaKnown RBP20.33■□□□□ 0.85
TSPAN4-212ENST00000494815 ACTR2P61160 394 aa20.33■□□□□ 0.85
TSPAN4-212ENST00000494815 GPS2Q13227 327 aa20.33■□□□□ 0.85
TSPAN4-212ENST00000494815 ALCAMQ13740 583 aa20.33■□□□□ 0.85
TSPAN4-212ENST00000494815 OTUD6AQ7L8S5 288 aa20.33■□□□□ 0.85
TSPAN4-212ENST00000494815 SHCBP1Q8NEM2 672 aa20.33■□□□□ 0.85
TSPAN4-212ENST00000494815 NEK11Q8NG66 645 aa20.33■□□□□ 0.85
TSPAN4-212ENST00000494815 DNAJC7Q99615 494 aa20.33■□□□□ 0.85
TSPAN4-212ENST00000494815 FAM184BQ9ULE4 1060 aa20.33■□□□□ 0.85
TSPAN4-212ENST00000494815 A0A1W2PQJ5 194 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 CETPP11597 493 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 MIS18BP1Q6P0N0 1132 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 ABHD15Q6UXT9 468 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 TMTC1Q8IUR5 882 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 OR8K1Q8NGG5 319 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 DRC1Q96MC2 740 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 STRA6Q9BX79 667 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 FUT8Q9BYC5 575 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 GABBR1Q9UBS5 961 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 RNF225M0QZC1 329 aaPredicted RBP20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 BACH1O14867 736 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 USO1O60763 962 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 KCTD2Q14681 263 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 XKR9Q5GH70 373 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 FRMD5Q7Z6J6 570 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 SIK3Q9Y2K2 1263 aa20.32■□□□□ 0.84
TSPAN4-212ENST00000494815 ZMYM2Q9UBW7 1377 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 SLC16A3O15427 465 aaKnown RBP20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 PPP1R37O75864 691 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 NR3C1P04150 777 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 PLS3P13797 630 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 GTF2A2P52657 109 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 ERVK-9P63128 1117 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 ERVK-24P63145 666 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 FSTL1Q12841 308 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 Q3C1V9 767 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 ANO5Q75V66 913 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 GBA2Q9HCG7 927 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 DNAJC25-GNG10A0A024R161 153 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 TGFB1I1O43294 461 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 TGFB3P10600 412 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 SP2Q02086 613 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 KCNA1Q09470 495 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 ZC2HC1CQ53FD0 456 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms