RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 COLGALT1Q8NBJ5 622 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 TMEM87AQ8NBN3 555 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 SMRP1Q8NCR6 262 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 CCDC12Q8WUD4 166 aaPredicted RBP10.92□□□□□ -0.66
UBR4-216ENST00000494503 MSLNLQ96KJ4 702 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 TCF25Q9BQ70 676 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 C6orf50Q9HD87 102 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 TYW1Q9NV66 732 aaKnown RBP10.92□□□□□ -0.66
UBR4-216ENST00000494503 CLEC1BQ9P126 229 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 GABBR1Q9UBS5 961 aa10.92□□□□□ -0.66
UBR4-216ENST00000494503 PUF60Q9UHX1 559 aaKnown RBP10.92□□□□□ -0.66
UBR4-216ENST00000494503 TMEM221A6NGB7 291 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 M0R296 226 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 GLP2RO95838 553 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 LAG3P18627 525 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 TMOD1P28289 359 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 CDC27P30260 824 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 PBX3P40426 434 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 TECP42680 631 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 CRYBB1P53674 252 aaPredicted RBP10.91□□□□□ -0.66
UBR4-216ENST00000494503 SETQ01105 290 aaPredicted RBP10.91□□□□□ -0.66
UBR4-216ENST00000494503 COASYQ13057 564 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 KRT32Q14532 448 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 ADCK5Q3MIX3 580 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 FAM228AQ86W67 206 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 LRRC71Q8N4P6 559 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 BBXQ8WY36 941 aaPredicted RBP10.91□□□□□ -0.66
UBR4-216ENST00000494503 EDAQ92838 391 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 RGS18Q9NS28 235 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 CEP131Q9UPN4 1083 aa10.91□□□□□ -0.66
UBR4-216ENST00000494503 CCDC196A0A1B0GTZ2 297 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 ATG7O95352 703 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 C22orf31O95567 290 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 EYA4O95677 639 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 CPA1P15085 419 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 ADD1P35611 737 aaKnown RBP10.9□□□□□ -0.66
UBR4-216ENST00000494503 NLRP11P59045 1033 aaKnown RBP10.9□□□□□ -0.66
UBR4-216ENST00000494503 ERVFC1P60507 584 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 KRT17Q04695 432 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 UBE3AQ05086 875 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 PFKFB3Q16875 520 aaPredicted RBP10.9□□□□□ -0.66
UBR4-216ENST00000494503 EFCAB12Q6NXP0 572 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 TRIM67Q6ZTA4 783 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 NIPA1Q7RTP0 329 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 TMC7Q7Z402 723 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 SMAP1Q8IYB5 467 aaPredicted RBP10.9□□□□□ -0.66
UBR4-216ENST00000494503 LRRC43Q8N309 656 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 RASGRP4Q8TDF6 673 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 NLRP7Q8WX94 980 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 JAKMIP1Q96N16 626 aaKnown RBP10.9□□□□□ -0.66
UBR4-216ENST00000494503 ZNF558Q96NG5 402 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 PHF7Q9BWX1 381 aaPredicted RBP10.9□□□□□ -0.66
UBR4-216ENST00000494503 TBC1D22BQ9NU19 505 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 TMEM161AQ9NX61 479 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 PCDHA10Q9Y5I2 948 aa10.9□□□□□ -0.66
UBR4-216ENST00000494503 IGKV6D-21A0A0A0MT36 114 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 FSD2A1L4K1 749 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 C9IYK1 514 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 HOXA2O43364 376 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 HMGB1P09429 215 aaKnown RBP10.89□□□□□ -0.67
UBR4-216ENST00000494503 FGFR4P22455 802 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 GNA11P29992 359 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 CLK2P49760 499 aaKnown RBP10.89□□□□□ -0.67
UBR4-216ENST00000494503 ZXDAP98168 799 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 EXOSC10Q01780 885 aaKnown RBP10.89□□□□□ -0.67
UBR4-216ENST00000494503 FUT2Q10981 343 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 DUSP6Q16828 381 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 ZNF746Q6NUN9 644 aaPredicted RBP10.89□□□□□ -0.67
UBR4-216ENST00000494503 Q6ZUG5 572 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 CRIPAKQ8N1N5 446 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 BRF1Q92994 677 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 PHKBQ93100 1093 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 FAM167AQ96KS9 214 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 CDCA3Q99618 268 aaPredicted RBP10.89□□□□□ -0.67
UBR4-216ENST00000494503 SLC26A6Q9BXS9 759 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 KCNH6Q9H252 994 aa10.89□□□□□ -0.67
UBR4-216ENST00000494503 IGLV3-22A0A075B6J6 115 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 WDR64B1ANS9 1081 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 ZBTB42B2RXF5 422 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 LOC730098B7Z3J9 87 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 MAGEB2O15479 319 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 DHX15O43143 795 aaKnown RBP10.88□□□□□ -0.67
UBR4-216ENST00000494503 GAS7O60861 476 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 GPR32O75388 356 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 CDC45O75419 566 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 OATP04181 439 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 ATP4AP20648 1035 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 PPM1AP35813 382 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 PRKCEQ02156 737 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 TBC1D8BQ0IIM8 1120 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 BMS1Q14692 1282 aaKnown RBP10.88□□□□□ -0.67
UBR4-216ENST00000494503 CBX2Q14781 532 aaPredicted RBP10.88□□□□□ -0.67
UBR4-216ENST00000494503 LONRF3Q496Y0 759 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 BMP2KLQ5H9B9 411 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 MCTP2Q6DN12 878 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 PDE12Q6L8Q7 609 aaKnown RBP10.88□□□□□ -0.67
UBR4-216ENST00000494503 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
UBR4-216ENST00000494503 KCNT2Q6UVM3 1135 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms