RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 EPN1Q9Y6I3 576 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-225ENST00000494465 NDUFA10O95299 355 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 PLS3P13797 630 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 Q3C1V9 767 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 XKR9Q5GH70 373 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 STXBP4Q6ZWJ1 553 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 TRMT1LQ7Z2T5 733 aaKnown RBP18.17■□□□□ 0.5
ATG4B-225ENST00000494465 CCDC60Q8IWA6 550 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-225ENST00000494465 TIPINQ9BVW5 301 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 GPRC5CQ9NQ84 441 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 DMAC2Q9NW81 257 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 LARSQ9P2J5 1176 aaKnown RBP18.17■□□□□ 0.5
ATG4B-225ENST00000494465 DNAI1Q9UI46 699 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 POTEB2H3BUK9 544 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 CDK17Q00537 523 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 TSR1Q2NL82 804 aaKnown RBP18.17■□□□□ 0.5
ATG4B-225ENST00000494465 SWSAP1Q6NVH7 229 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 ZNF397Q8NF99 534 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-225ENST00000494465 AGPAT3Q9NRZ7 376 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 PLAGL2Q9UPG8 496 aa18.17■□□□□ 0.5
ATG4B-225ENST00000494465 ZNFX1Q9P2E3 1918 aaKnown RBP18.16■□□□□ 0.5
ATG4B-225ENST00000494465 SLC25A27O95847 323 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 PSAPP07602 524 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 ILDR2Q71H61 639 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 ATP6V0A1Q93050 837 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 FGD4Q96M96 766 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 WDR24Q96S15 920 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 EDEM3Q9BZQ6 932 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 GBP3Q9H0R5 595 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 K7ENM7 598 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 CTIFO43310 598 aaKnown RBP18.16■□□□□ 0.5
ATG4B-225ENST00000494465 SORBS3O60504 671 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 SP4Q02446 784 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 MAP1SQ66K74 1059 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-225ENST00000494465 DPY19L2P1Q6NXN4 242 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 NEK11Q8NG66 645 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 ZNF526Q8TF50 670 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-225ENST00000494465 CCDC43Q96MW1 224 aaKnown RBP18.16■□□□□ 0.5
ATG4B-225ENST00000494465 CRACR2AQ9BSW2 395 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 LZTFL1Q9NQ48 299 aa18.16■□□□□ 0.5
ATG4B-225ENST00000494465 DYNC1I1O14576 645 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 ATG7O95352 703 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 ABL1P00519 1130 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 ARHGAP25P42331 645 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 SEPT14Q6ZU15 432 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 SLC35C1Q96A29 364 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 DRC1Q96MC2 740 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 IRX2Q9BZI1 471 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-225ENST00000494465 ST6GALNAC4Q9H4F1 302 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 L2HGDHQ9H9P8 463 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 METTL14Q9HCE5 456 aaKnown RBP18.15■□□□□ 0.5
ATG4B-225ENST00000494465 IGSF9BQ9UPX0 1349 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 SUPT20HL2P0C7V6 817 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 EPB41P11171 864 aaKnown RBP18.15■□□□□ 0.5
ATG4B-225ENST00000494465 XRCC5P13010 732 aaKnown RBP18.15■□□□□ 0.5
ATG4B-225ENST00000494465 OSBPP22059 807 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 APBA1Q02410 837 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 PPP2R3AQ06190 1150 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 SNAPC2Q13487 334 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 CYFIP1Q7L576 1253 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 HS2ST1Q7LGA3 356 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 TSC1Q92574 1164 aa18.15■□□□□ 0.5
ATG4B-225ENST00000494465 NHEJ1Q9H9Q4 299 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-225ENST00000494465 ZNHIT6Q9NWK9 470 aaKnown RBP18.15■□□□□ 0.5
ATG4B-225ENST00000494465 SYNGAP1Q96PV0 1343 aa18.14■□□□□ 0.49
ATG4B-225ENST00000494465 LRRC53A6NM62 1247 aa18.14■□□□□ 0.49
ATG4B-225ENST00000494465 GNG11P61952 73 aa18.14■□□□□ 0.49
ATG4B-225ENST00000494465 ALCAMQ13740 583 aa18.14■□□□□ 0.49
ATG4B-225ENST00000494465 SLC9A9Q8IVB4 645 aa18.14■□□□□ 0.49
ATG4B-225ENST00000494465 SLC10A4Q96EP9 437 aa18.14■□□□□ 0.49
ATG4B-225ENST00000494465 MKNK1Q9BUB5 465 aa18.14■□□□□ 0.49
ATG4B-225ENST00000494465 LSM14BQ9BX40 385 aaKnown RBP18.14■□□□□ 0.49
ATG4B-225ENST00000494465 PDLIM7Q9NR12 457 aa18.14■□□□□ 0.49
ATG4B-225ENST00000494465 CLEC11AQ9Y240 323 aa18.14■□□□□ 0.49
ATG4B-225ENST00000494465 DNAJC25-GNG10A0A024R161 153 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 SOCS7O14512 581 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 DKC1O60832 514 aaKnown RBP eCLIP18.13■□□□□ 0.49
ATG4B-225ENST00000494465 AFPP02771 609 aaKnown RBP18.13■□□□□ 0.49
ATG4B-225ENST00000494465 NCKAP1LP55160 1127 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 GTF2BQ00403 316 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 PRKCEQ02156 737 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 PDXDC1Q6P996 788 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 RRAGAQ7L523 313 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 OTUD6AQ7L8S5 288 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 CEP72Q9P209 647 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 ARHGAP20Q9P2F6 1191 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 MCM3APO60318 1980 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 PGK2P07205 417 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 PLEKP08567 350 aaPredicted RBP18.13■□□□□ 0.49
ATG4B-225ENST00000494465 ATP4AP20648 1035 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 UBA1P22314 1058 aaKnown RBP18.13■□□□□ 0.49
ATG4B-225ENST00000494465 PSMC2P35998 433 aaKnown RBP18.13■□□□□ 0.49
ATG4B-225ENST00000494465 PEX3P56589 373 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 FAM102BQ5T8I3 360 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 MIS18BP1Q6P0N0 1132 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 HAUS6Q7Z4H7 955 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 FAM186BQ8IYM0 893 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 CCDC170Q8IYT3 715 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 GOLGA5Q8TBA6 731 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 TMEM174Q8WUU8 243 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms