RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ZNF662Q6ZS27 426 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 SMAP1Q8IYB5 467 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 FAM186BQ8IYM0 893 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 CCDC170Q8IYT3 715 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 ANKRD13AQ8IZ07 590 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 SLC35F6Q8N357 371 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 ZNF397Q8NF99 534 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 SLC35C1Q96A29 364 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 BORCS6Q96GS4 357 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 CDHR1Q96JP9 859 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 CCDC43Q96MW1 224 aaKnown RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 MOV10L1Q9BXT6 1211 aaKnown RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 NHEJ1Q9H9Q4 299 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 METTL14Q9HCE5 456 aaKnown RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 JPH1Q9HDC5 661 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 DMAC2Q9NW81 257 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 TRIM10Q9UDY6 481 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 FBXO40Q9UH90 709 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 PLAGL2Q9UPG8 496 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 AGTPBP1Q9UPW5 1226 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 TELO2Q9Y4R8 837 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 MRFAP1Q9Y605 127 aa11.7□□□□□ -0.54
CLCN6-208ENST00000494028 ZNFX1Q9P2E3 1918 aaKnown RBP11.7□□□□□ -0.54
CLCN6-208ENST00000494028 SPATA31C2B4DYI2 1134 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 CXCL11O14625 94 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 ZNF263O14978 683 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 MAFGO15525 162 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 TADA3O75528 432 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 URI1O94763 535 aaPredicted RBP11.69□□□□□ -0.54
CLCN6-208ENST00000494028 ABL1P00519 1130 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 XRCC5P13010 732 aaKnown RBP11.69□□□□□ -0.54
CLCN6-208ENST00000494028 ICAM3P32942 547 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 KIF11P52732 1056 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 IRX3P78415 501 aaPredicted RBP11.69□□□□□ -0.54
CLCN6-208ENST00000494028 PRKCEQ02156 737 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 CNTN2Q02246 1040 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 APBA1Q02410 837 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 NAA30Q147X3 362 aaPredicted RBP11.69□□□□□ -0.54
CLCN6-208ENST00000494028 GNPTABQ3T906 1256 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 RRAGAQ7L523 313 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 GPIHBP1Q8IV16 184 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 SLC9A9Q8IVB4 645 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 CCDC60Q8IWA6 550 aaPredicted RBP11.69□□□□□ -0.54
CLCN6-208ENST00000494028 DNERQ8NFT8 737 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 GOLGA5Q8TBA6 731 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
CLCN6-208ENST00000494028 ATP6V0A1Q93050 837 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 JAKMIP2Q96AA8 810 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 DRC1Q96MC2 740 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 SPATC1LQ9H0A9 340 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 GBP3Q9H0R5 595 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 ASCC2Q9H1I8 757 aaPredicted RBP11.69□□□□□ -0.54
CLCN6-208ENST00000494028 ST6GALNAC4Q9H4F1 302 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 HAUS4Q9H6D7 363 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 SIX2Q9NPC8 291 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 PLCB1Q9NQ66 1216 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 GPRC5CQ9NQ84 441 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 MYO1AQ9UBC5 1043 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 GABBR1Q9UBS5 961 aa11.69□□□□□ -0.54
CLCN6-208ENST00000494028 SSU72P8A0A1W2PR75 194 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 TLR2O60603 784 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 LCA5LO95447 670 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 SUPT20HL2P0C7V6 817 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 UBA1P22314 1058 aaKnown RBP11.68□□□□□ -0.54
CLCN6-208ENST00000494028 GJA5P36382 358 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 VAV2P52735 878 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 NPEPPSP55786 919 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 ACTR2P61160 394 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 RBM10P98175 930 aaKnown RBP11.68□□□□□ -0.54
CLCN6-208ENST00000494028 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-208ENST00000494028 ELF2Q15723 593 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 XKR9Q5GH70 373 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 ZNF569Q5MCW4 686 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 UTP14CQ5TAP6 766 aaKnown RBP11.68□□□□□ -0.54
CLCN6-208ENST00000494028 ANO5Q75V66 913 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 MAEAQ7L5Y9 396 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 HS2ST1Q7LGA3 356 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 CACNA2D4Q7Z3S7 1137 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 C12orf56Q8IXR9 622 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-208ENST00000494028 SYN2Q92777 582 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-208ENST00000494028 HVCN1Q96D96 273 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 FGD4Q96M96 766 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 IWS1Q96ST2 819 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 SH2D3AQ9BRG2 576 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 CRACR2AQ9BSW2 395 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 TAF1DQ9H5J8 278 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-208ENST00000494028 NLRC4Q9NPP4 1024 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 LARSQ9P2J5 1176 aaKnown RBP11.68□□□□□ -0.54
CLCN6-208ENST00000494028 SLC9A2Q9UBY0 812 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 AJAP1Q9UKB5 411 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-208ENST00000494028 TFR2Q9UP52 801 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 PCDHB13Q9Y5F0 798 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 PCDHA10Q9Y5I2 948 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 FHOD1Q9Y613 1164 aa11.68□□□□□ -0.54
CLCN6-208ENST00000494028 GTPBP10A4D1E9 387 aaKnown RBP11.67□□□□□ -0.54
CLCN6-208ENST00000494028 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
CLCN6-208ENST00000494028 SOWAHBA6NEL2 793 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms