RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ADCY3O60266 1144 aa6.58□□□□□ -1.36
SMC4-223ENST00000493695 C6orf222P0C671 652 aaPredicted RBP6.58□□□□□ -1.36
SMC4-223ENST00000493695 ATP2C1P98194 919 aaPredicted RBP6.58□□□□□ -1.36
SMC4-223ENST00000493695 PURAQ00577 322 aaKnown RBP6.58□□□□□ -1.36
SMC4-223ENST00000493695 KRTAP1-1Q07627 177 aa6.58□□□□□ -1.36
SMC4-223ENST00000493695 RRP1BQ14684 758 aaKnown RBP6.58□□□□□ -1.36
SMC4-223ENST00000493695 ACAP1Q15027 740 aa6.58□□□□□ -1.36
SMC4-223ENST00000493695 GSPT2Q8IYD1 628 aaKnown RBP6.58□□□□□ -1.36
SMC4-223ENST00000493695 GMLQ99445 158 aa6.58□□□□□ -1.36
SMC4-223ENST00000493695 TTPALQ9BTX7 342 aa6.58□□□□□ -1.36
SMC4-223ENST00000493695 DHRS4Q9BTZ2 278 aa6.58□□□□□ -1.36
SMC4-223ENST00000493695 AGO3Q9H9G7 860 aaKnown RBP6.58□□□□□ -1.36
SMC4-223ENST00000493695 DIAPH1O60610 1272 aaKnown RBP6.57□□□□□ -1.36
SMC4-223ENST00000493695 APEX1P27695 318 aaKnown RBP6.57□□□□□ -1.36
SMC4-223ENST00000493695 TMPRSS6Q8IU80 811 aa6.57□□□□□ -1.36
SMC4-223ENST00000493695 GCDHQ92947 438 aaPredicted RBP6.57□□□□□ -1.36
SMC4-223ENST00000493695 RPL10LQ96L21 214 aaKnown RBP6.57□□□□□ -1.36
SMC4-223ENST00000493695 SH3BP1Q9Y3L3 701 aa6.57□□□□□ -1.36
SMC4-223ENST00000493695 KDM2BQ8NHM5 1336 aa6.56□□□□□ -1.36
SMC4-223ENST00000493695 FAM153BP0C7A2 387 aa6.56□□□□□ -1.36
SMC4-223ENST00000493695 LACTBP83111 547 aaPredicted RBP6.56□□□□□ -1.36
SMC4-223ENST00000493695 HGFACQ04756 655 aa6.56□□□□□ -1.36
SMC4-223ENST00000493695 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
SMC4-223ENST00000493695 ZNF627Q7L945 461 aa6.56□□□□□ -1.36
SMC4-223ENST00000493695 LDLRAD3Q86YD5 345 aa6.56□□□□□ -1.36
SMC4-223ENST00000493695 ANKRD35Q8N283 1001 aa6.56□□□□□ -1.36
SMC4-223ENST00000493695 EXOC2Q96KP1 924 aa6.56□□□□□ -1.36
SMC4-223ENST00000493695 MAGEB10Q96LZ2 347 aaPredicted RBP6.56□□□□□ -1.36
SMC4-223ENST00000493695 ZNF703Q9H7S9 590 aaPredicted RBP6.56□□□□□ -1.36
SMC4-223ENST00000493695 CEP72Q9P209 647 aa6.56□□□□□ -1.36
SMC4-223ENST00000493695 HECAQ9UBI9 543 aaPredicted RBP6.56□□□□□ -1.36
SMC4-223ENST00000493695 MRPS23Q9Y3D9 190 aaKnown RBP6.56□□□□□ -1.36
SMC4-223ENST00000493695 RBM8AQ9Y5S9 174 aaKnown RBP6.56□□□□□ -1.36
SMC4-223ENST00000493695 SLC12A8A0AV02 714 aa6.55□□□□□ -1.36
SMC4-223ENST00000493695 H2AFYO75367 372 aaKnown RBP6.55□□□□□ -1.36
SMC4-223ENST00000493695 KRT37O76014 449 aa6.55□□□□□ -1.36
SMC4-223ENST00000493695 RASGRF1Q13972 1273 aa6.55□□□□□ -1.36
SMC4-223ENST00000493695 TM4SF20Q53R12 229 aa6.55□□□□□ -1.36
SMC4-223ENST00000493695 KLHDC10Q6PID8 442 aa6.55□□□□□ -1.36
SMC4-223ENST00000493695 ZNF662Q6ZS27 426 aa6.55□□□□□ -1.36
SMC4-223ENST00000493695 NOSTRINQ8IVI9 506 aa6.55□□□□□ -1.36
SMC4-223ENST00000493695 MPHOSPH9Q99550 1183 aa6.55□□□□□ -1.36
SMC4-223ENST00000493695 ASB1Q9Y576 335 aa6.55□□□□□ -1.36
SMC4-223ENST00000493695 RASGRP1O95267 797 aa6.54□□□□□ -1.36
SMC4-223ENST00000493695 FSTL4Q6MZW2 842 aa6.54□□□□□ -1.36
SMC4-223ENST00000493695 ZNF575Q86XF7 245 aa6.54□□□□□ -1.36
SMC4-223ENST00000493695 C2orf69Q8N8R5 385 aa6.54□□□□□ -1.36
SMC4-223ENST00000493695 ANKRD53Q8N9V6 530 aa6.54□□□□□ -1.36
SMC4-223ENST00000493695 RABGGTAQ92696 567 aa6.54□□□□□ -1.36
SMC4-223ENST00000493695 ZNF428Q96B54 188 aa6.54□□□□□ -1.36
SMC4-223ENST00000493695 SLC52A2Q9HAB3 445 aa6.54□□□□□ -1.36
SMC4-223ENST00000493695 SAE1Q9UBE0 346 aaPredicted RBP6.54□□□□□ -1.36
SMC4-223ENST00000493695 DMRT1Q9Y5R6 373 aa6.54□□□□□ -1.36
SMC4-223ENST00000493695 RASSF10A6NK89 507 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 GOLGA6L22H0YM25 854 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 SCNN1GP51170 649 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 BPIFB4P59827 614 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 SAFB2Q14151 953 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMC4-223ENST00000493695 ELAVL1Q15717 326 aaKnown RBP6.53□□□□□ -1.36
SMC4-223ENST00000493695 KRT40Q6A162 431 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 Q6ZRM9 215 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 GAREM2Q75VX8 874 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 MIEF2Q96C03 454 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 PGBD4Q96DM1 585 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 NRDE2Q9H7Z3 1164 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 PODXL2Q9NZ53 605 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 NCDNQ9UBB6 729 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 RCAN3Q9UKA8 241 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 DENND2AQ9ULE3 1009 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 MSRB2Q9Y3D2 182 aa6.53□□□□□ -1.36
SMC4-223ENST00000493695 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
SMC4-223ENST00000493695 FAM20BO75063 409 aa6.52□□□□□ -1.37
SMC4-223ENST00000493695 EFCAB14O75071 495 aa6.52□□□□□ -1.37
SMC4-223ENST00000493695 MAN2A2P49641 1150 aa6.52□□□□□ -1.37
SMC4-223ENST00000493695 SESN2P58004 480 aaPredicted RBP6.52□□□□□ -1.37
SMC4-223ENST00000493695 IRF9Q00978 393 aa6.52□□□□□ -1.37
SMC4-223ENST00000493695 GFM2Q969S9 779 aaKnown RBP6.52□□□□□ -1.37
SMC4-223ENST00000493695 SLC7A6OSQ96CW6 309 aaPredicted RBP6.52□□□□□ -1.37
SMC4-223ENST00000493695 AGAP2Q99490 1192 aa6.52□□□□□ -1.37
SMC4-223ENST00000493695 PRRX2Q99811 253 aa6.52□□□□□ -1.37
SMC4-223ENST00000493695 CCDC113Q9H0I3 377 aa6.52□□□□□ -1.37
SMC4-223ENST00000493695 VWA7Q9Y334 891 aa6.52□□□□□ -1.37
SMC4-223ENST00000493695 TMEM191CA6NGB0 347 aa6.51□□□□□ -1.37
SMC4-223ENST00000493695 TCIRG1Q13488 830 aa6.51□□□□□ -1.37
SMC4-223ENST00000493695 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
SMC4-223ENST00000493695 LAIR1Q6GTX8 287 aa6.51□□□□□ -1.37
SMC4-223ENST00000493695 LPPQ93052 612 aa6.51□□□□□ -1.37
SMC4-223ENST00000493695 ARL8AQ96BM9 186 aa6.51□□□□□ -1.37
SMC4-223ENST00000493695 GPR87Q9BY21 358 aa6.51□□□□□ -1.37
SMC4-223ENST00000493695 CELF4Q9BZC1 486 aaKnown RBP6.51□□□□□ -1.37
SMC4-223ENST00000493695 SLC6A15Q9H2J7 730 aa6.51□□□□□ -1.37
SMC4-223ENST00000493695 SFMBT1Q9UHJ3 866 aa6.51□□□□□ -1.37
SMC4-223ENST00000493695 CTDP1Q9Y5B0 961 aaPredicted RBP6.51□□□□□ -1.37
SMC4-223ENST00000493695 B3GALT1Q9Y5Z6 326 aa6.51□□□□□ -1.37
SMC4-223ENST00000493695 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.5□□□□□ -1.37
SMC4-223ENST00000493695 UBE2QL1A1L167 161 aa6.5□□□□□ -1.37
SMC4-223ENST00000493695 PMS2P1A4D2B8 440 aa6.5□□□□□ -1.37
SMC4-223ENST00000493695 BMP5P22003 454 aa6.5□□□□□ -1.37
SMC4-223ENST00000493695 RBM25P49756 843 aaKnown RBP6.5□□□□□ -1.37
SMC4-223ENST00000493695 SLC6A3Q01959 620 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms