RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 CCDC81Q6ZN84 652 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 RBM43Q6ZSC3 357 aaKnown RBP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 DNAJC10Q8IXB1 793 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 C7orf61Q8IZ16 206 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 KIF18AQ8NI77 898 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 GPRASP2Q96D09 838 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 ZNF496Q96IT1 587 aaPredicted RBP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 CHAMP1Q96JM3 812 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 TTC14Q96N46 770 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 MCMBPQ9BTE3 642 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 SLC12A9Q9BXP2 914 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 PAXBP1Q9Y5B6 917 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 EP400Q96L91 3159 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 ZNF831Q5JPB2 1677 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 BCL9O00512 1426 aa4.03□□□□□ -1.76
CRNKL1-203ENST00000490258 BRCA1P38398 1863 aaKnown RBP4.03□□□□□ -1.77
CRNKL1-203ENST00000490258 CARMIL3Q8ND23 1372 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 PALLDQ8WX93 1383 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 RAD50Q92878 1312 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 A0A1W2PQH9 124 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 FAM86C2PA6NEL3 165 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 H0Y8X5 98 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 CYR61O00622 381 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 AP5Z1O43299 807 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 CAVIN2O95810 425 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 A1BGP04217 495 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 SYPP08247 313 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 VAV1P15498 845 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 MCCP23508 829 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 HSPA4P34932 840 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 NEK4P51957 841 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 PDE1AP54750 535 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 CHRNEQ04844 493 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 DNTTIP2Q5QJE6 756 aaKnown RBP4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 SLC4A10Q6U841 1118 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 TTLL7Q6ZT98 887 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 PLA2G4DQ86XP0 818 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 UNC5CLQ8IV45 518 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 KRT222Q8N1A0 295 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 SYNE4Q8N205 404 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 C17orf53Q8N3J3 647 aaPredicted RBP4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 ZNF397Q8NF99 534 aaPredicted RBP4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 ZCRB1Q8TBF4 217 aaKnown RBP4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 PIGBQ92521 554 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 KIF1BPQ96EK5 621 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 FCRL2Q96LA5 508 aaPredicted RBP4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 ZNF830Q96NB3 372 aaPredicted RBP4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 TGIF2Q9GZN2 237 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 PDGFDQ9GZP0 370 aaPredicted RBP4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 KLHL25Q9H0H3 589 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 TSPYL1Q9H0U9 437 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 ACBD3Q9H3P7 528 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 GP6Q9HCN6 339 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 SRP68Q9UHB9 627 aaKnown RBP4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 EFR3BQ9Y2G0 817 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 ZBTB1Q9Y2K1 713 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 ZNF451Q9Y4E5 1061 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 PCDHB12Q9Y5F1 795 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 ATP6V1DQ9Y5K8 247 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 USP16Q9Y5T5 823 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 PXDNLA1KZ92 1463 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 ABCC12Q96J65 1359 aa4.02□□□□□ -1.77
CRNKL1-203ENST00000490258 LRRC37AA6NMS7 1700 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 TIAM2Q8IVF5 1701 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 USP42Q9H9J4 1324 aaKnown RBP4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 ANKRD62A6NC57 917 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 CHL1O00533 1208 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 NEMFO60524 1076 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 HMMRO75330 724 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 CCDC192P0DO97 292 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 C6P13671 934 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 GPTP24298 496 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 CHMLP26374 656 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 KCNJ6P48051 423 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 CASP7P55210 303 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 EIF4A1P60842 406 aaKnown RBP4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 RBM6P78332 1123 aaKnown RBP4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 CYP4F3Q08477 520 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 TEFQ10587 303 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 DUSP4Q13115 394 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 SNX17Q15036 470 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 DDB1Q16531 1140 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 HSF5Q4G112 596 aaPredicted RBP4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 PLEKHO1Q53GL0 409 aaPredicted RBP4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 MUM1L1Q5H9M0 696 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 TSHZ3Q63HK5 1081 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 SARM1Q6SZW1 724 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 DEFB132Q7Z7B7 95 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 ZFPM1Q8IX07 1006 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 C16orf71Q8IYS4 520 aaPredicted RBP4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 TDRD7Q8NHU6 1098 aaKnown RBP4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 RTF1Q92541 710 aaKnown RBP4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 SMARCC1Q92922 1105 aaPredicted RBP4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 TIGD1Q96MW7 591 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 FERD3LQ96RJ6 166 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 DNAJC2Q99543 621 aaKnown RBP4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 MEIS3Q99687 375 aa4.01□□□□□ -1.77
CRNKL1-203ENST00000490258 MKRN2Q9H000 416 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms