RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 MFSD14AQ96MC6 490 aa18.01■□□□□ 0.47
PLOD3-216ENST00000489927 ZMYND12Q9H0C1 365 aa18.01■□□□□ 0.47
PLOD3-216ENST00000489927 TLR9Q9NR96 1032 aa18.01■□□□□ 0.47
PLOD3-216ENST00000489927 TBC1D22BQ9NU19 505 aa18.01■□□□□ 0.47
PLOD3-216ENST00000489927 USP15Q9Y4E8 981 aaPredicted RBP18.01■□□□□ 0.47
PLOD3-216ENST00000489927 PIEZO1Q92508 2521 aa18.01■□□□□ 0.47
PLOD3-216ENST00000489927 LOC730098B7Z3J9 87 aa18■□□□□ 0.47
PLOD3-216ENST00000489927 METAP2P50579 478 aaKnown RBP eCLIP18■□□□□ 0.47
PLOD3-216ENST00000489927 FAM189BP81408 668 aa18■□□□□ 0.47
PLOD3-216ENST00000489927 SETQ01105 290 aaPredicted RBP18■□□□□ 0.47
PLOD3-216ENST00000489927 KRT32Q14532 448 aa18■□□□□ 0.47
PLOD3-216ENST00000489927 ZNF746Q6NUN9 644 aaPredicted RBP18■□□□□ 0.47
PLOD3-216ENST00000489927 SMAP1Q8IYB5 467 aaPredicted RBP18■□□□□ 0.47
PLOD3-216ENST00000489927 THNSL1Q8IYQ7 743 aa18■□□□□ 0.47
PLOD3-216ENST00000489927 COLGALT1Q8NBJ5 622 aa18■□□□□ 0.47
PLOD3-216ENST00000489927 VN1R2Q8NFZ6 395 aa18■□□□□ 0.47
PLOD3-216ENST00000489927 ATP6V0A4Q9HBG4 840 aa18■□□□□ 0.47
PLOD3-216ENST00000489927 TMEM161AQ9NX61 479 aa18■□□□□ 0.47
PLOD3-216ENST00000489927 FNDC1Q4ZHG4 1894 aaPredicted RBP18■□□□□ 0.47
PLOD3-216ENST00000489927 ESYT2A0FGR8 921 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 PSAPP07602 524 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 HMGB1P09429 215 aaKnown RBP17.99■□□□□ 0.47
PLOD3-216ENST00000489927 CPA1P15085 419 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 MRE11P49959 708 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 FGD1P98174 961 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 APOBRQ0VD83 1088 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 DSC3Q14574 896 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 REXO1Q8N1G1 1221 aaKnown RBP17.99■□□□□ 0.47
PLOD3-216ENST00000489927 CWH43Q9H720 699 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 ELAC1Q9H777 363 aaKnown RBP17.99■□□□□ 0.47
PLOD3-216ENST00000489927 C6orf50Q9HD87 102 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 GABBR1Q9UBS5 961 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 PCDHA10Q9Y5I2 948 aa17.99■□□□□ 0.47
PLOD3-216ENST00000489927 CCDC196A0A1B0GTZ2 297 aa17.98■□□□□ 0.47
PLOD3-216ENST00000489927 FSCN2O14926 492 aa17.98■□□□□ 0.47
PLOD3-216ENST00000489927 CLCN3P51790 818 aa17.98■□□□□ 0.47
PLOD3-216ENST00000489927 CBX2Q14781 532 aaPredicted RBP17.98■□□□□ 0.47
PLOD3-216ENST00000489927 PKN1Q16512 942 aa17.98■□□□□ 0.47
PLOD3-216ENST00000489927 DUSP6Q16828 381 aa17.98■□□□□ 0.47
PLOD3-216ENST00000489927 PRR16Q569H4 304 aa17.98■□□□□ 0.47
PLOD3-216ENST00000489927 MCTP2Q6DN12 878 aa17.98■□□□□ 0.47
PLOD3-216ENST00000489927 TRIM67Q6ZTA4 783 aa17.98■□□□□ 0.47
PLOD3-216ENST00000489927 CCDC12Q8WUD4 166 aaPredicted RBP17.98■□□□□ 0.47
PLOD3-216ENST00000489927 CDCA3Q99618 268 aaPredicted RBP17.98■□□□□ 0.47
PLOD3-216ENST00000489927 PHF7Q9BWX1 381 aaPredicted RBP17.98■□□□□ 0.47
PLOD3-216ENST00000489927 TCEAL9Q9UHQ7 104 aa17.98■□□□□ 0.47
PLOD3-216ENST00000489927 CEP131Q9UPN4 1083 aa17.98■□□□□ 0.47
PLOD3-216ENST00000489927 LAG3P18627 525 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 NLRP11P59045 1033 aaKnown RBP17.97■□□□□ 0.47
PLOD3-216ENST00000489927 PDE12Q6L8Q7 609 aaKnown RBP17.97■□□□□ 0.47
PLOD3-216ENST00000489927 LRRC55Q6ZSA7 311 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 Q6ZUG5 572 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 RASGRP4Q8TDF6 673 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 SUSD6Q92537 303 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 LENG9Q96B70 501 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 RPGRIP1Q96KN7 1286 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 CASD1Q96PB1 797 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 TMEM117Q9H0C3 514 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 RNF19AQ9NV58 838 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 AKT3Q9Y243 479 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 SAMM50Q9Y512 469 aa17.97■□□□□ 0.47
PLOD3-216ENST00000489927 EVPLQ92817 2033 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 TECTAO75443 2155 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 FSD2A1L4K1 749 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 TMEM221A6NGB7 291 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 M0R296 226 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 MAGEB2O15479 319 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 PRPF3O43395 683 aaKnown RBP17.96■□□□□ 0.47
PLOD3-216ENST00000489927 CDC45O75419 566 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 GNA11P29992 359 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 CIITAP33076 1130 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 ZXDAP98168 799 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 PLCB3Q01970 1234 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 KCNC3Q14003 757 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 PLPP4Q5VZY2 271 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 EFCAB12Q6NXP0 572 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 BMP8AQ7Z5Y6 402 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 LRRC71Q8N4P6 559 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 LINC01465Q8N7H1 131 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 MRPS27Q92552 414 aaKnown RBP17.96■□□□□ 0.47
PLOD3-216ENST00000489927 BRF1Q92994 677 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 PHKBQ93100 1093 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 FAM167AQ96KS9 214 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 MAP7D2Q96T17 732 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 TCF25Q9BQ70 676 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 ADAMTS10Q9H324 1103 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 LZTS1Q9Y250 596 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 ZNF318Q5VUA4 2279 aa17.96■□□□□ 0.47
PLOD3-216ENST00000489927 NID2Q14112 1375 aa17.95■□□□□ 0.46
PLOD3-216ENST00000489927 WDR64B1ANS9 1081 aa17.95■□□□□ 0.46
PLOD3-216ENST00000489927 ZNF862O60290 1169 aa17.95■□□□□ 0.46
PLOD3-216ENST00000489927 ATF7P17544 494 aaPredicted RBP17.95■□□□□ 0.46
PLOD3-216ENST00000489927 EIF4BP23588 611 aaKnown RBP17.95■□□□□ 0.46
PLOD3-216ENST00000489927 PBX3P40426 434 aa17.95■□□□□ 0.46
PLOD3-216ENST00000489927 TMEM184AQ6ZMB5 413 aa17.95■□□□□ 0.46
PLOD3-216ENST00000489927 PBXIP1Q96AQ6 731 aa17.95■□□□□ 0.46
PLOD3-216ENST00000489927 ZNF668Q96K58 619 aaPredicted RBP17.95■□□□□ 0.46
PLOD3-216ENST00000489927 JAKMIP1Q96N16 626 aaKnown RBP17.95■□□□□ 0.46
PLOD3-216ENST00000489927 ENTPD7Q9NQZ7 604 aa17.95■□□□□ 0.46
PLOD3-216ENST00000489927 HIDE1A8MVS5 230 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms