RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 RGS18Q9NS28 235 aa13.35□□□□□ -0.27
ACTN4-206ENST00000489451 FAM86C1Q9NVL1 165 aa13.35□□□□□ -0.27
ACTN4-206ENST00000489451 PRKAG3Q9UGI9 489 aa13.35□□□□□ -0.27
ACTN4-206ENST00000489451 ST3GAL5Q9UNP4 418 aa13.35□□□□□ -0.27
ACTN4-206ENST00000489451 GINS2Q9Y248 185 aa13.35□□□□□ -0.27
ACTN4-206ENST00000489451 RPS6KA5O75582 802 aa13.34□□□□□ -0.27
ACTN4-206ENST00000489451 CENPBP07199 599 aaPredicted RBP13.34□□□□□ -0.27
ACTN4-206ENST00000489451 HMGB1P09429 215 aaKnown RBP13.34□□□□□ -0.27
ACTN4-206ENST00000489451 IBSPP21815 317 aaPredicted RBP13.34□□□□□ -0.27
ACTN4-206ENST00000489451 RPS6KB1P23443 525 aa13.34□□□□□ -0.27
ACTN4-206ENST00000489451 RBM10P98175 930 aaKnown RBP13.34□□□□□ -0.27
ACTN4-206ENST00000489451 SMAD4Q13485 552 aaKnown RBP13.34□□□□□ -0.27
ACTN4-206ENST00000489451 UGCGQ16739 394 aa13.34□□□□□ -0.27
ACTN4-206ENST00000489451 NAALADL2Q58DX5 795 aa13.34□□□□□ -0.27
ACTN4-206ENST00000489451 ZNF484Q5JVG2 852 aa13.34□□□□□ -0.27
ACTN4-206ENST00000489451 FAM160B1Q5W0V3 765 aa13.34□□□□□ -0.27
ACTN4-206ENST00000489451 ZNF746Q6NUN9 644 aaPredicted RBP13.34□□□□□ -0.27
ACTN4-206ENST00000489451 MIS18BP1Q6P0N0 1132 aa13.34□□□□□ -0.27
ACTN4-206ENST00000489451 REXO1Q8N1G1 1221 aaKnown RBP13.34□□□□□ -0.27
ACTN4-206ENST00000489451 VN1R2Q8NFZ6 395 aa13.34□□□□□ -0.27
ACTN4-206ENST00000489451 ADAM2Q99965 735 aa13.34□□□□□ -0.27
ACTN4-206ENST00000489451 CWH43Q9H720 699 aa13.34□□□□□ -0.27
ACTN4-206ENST00000489451 NAP1L2Q9ULW6 460 aaPredicted RBP13.34□□□□□ -0.27
ACTN4-206ENST00000489451 KMT2EQ8IZD2 1858 aa13.33□□□□□ -0.27
ACTN4-206ENST00000489451 CACNA1BQ00975 2339 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 TECTAO75443 2155 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 NCK2O43639 380 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 EYA4O95677 639 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 STAG3L1P0CL83 205 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 FGFR1P11362 822 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 CLCN3P51790 818 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 EVCP57679 992 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 FAM189BP81408 668 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 SETQ01105 290 aaPredicted RBP13.33□□□□□ -0.28
ACTN4-206ENST00000489451 PRR16Q569H4 304 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 LRRC55Q6ZSA7 311 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
ACTN4-206ENST00000489451 BBXQ8WY36 941 aaPredicted RBP13.33□□□□□ -0.28
ACTN4-206ENST00000489451 TNPO1Q92973 898 aaKnown RBP13.33□□□□□ -0.28
ACTN4-206ENST00000489451 GJA10Q969M2 543 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 ADAMTS10Q9H324 1103 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 NCOA5Q9HCD5 579 aaKnown RBP13.33□□□□□ -0.28
ACTN4-206ENST00000489451 VPS54Q9P1Q0 977 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 GABBR1Q9UBS5 961 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 CD207Q9UJ71 328 aa13.33□□□□□ -0.28
ACTN4-206ENST00000489451 TBKBP1A7MCY6 615 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 MSH4O15457 936 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 ID4P47928 161 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 NRIP1P48552 1158 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 CRYBB1P53674 252 aaPredicted RBP13.32□□□□□ -0.28
ACTN4-206ENST00000489451 ERVFC1P60507 584 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 TOB2Q14106 344 aaPredicted RBP13.32□□□□□ -0.28
ACTN4-206ENST00000489451 NPY5RQ15761 445 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 IER5LQ5T953 404 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 BLOC1S2Q6QNY1 142 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 SLC24A5Q71RS6 500 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 SMAP1Q8IYB5 467 aaPredicted RBP13.32□□□□□ -0.28
ACTN4-206ENST00000489451 LRRC71Q8N4P6 559 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 EFHBQ8N7U6 833 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 SMRP1Q8NCR6 262 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 ZNF668Q96K58 619 aaPredicted RBP13.32□□□□□ -0.28
ACTN4-206ENST00000489451 RNF26Q9BY78 433 aaPredicted RBP13.32□□□□□ -0.28
ACTN4-206ENST00000489451 C6orf50Q9HD87 102 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 TBC1D22BQ9NU19 505 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 MUTYHQ9UIF7 546 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 BARX2Q9UMQ3 279 aaPredicted RBP13.32□□□□□ -0.28
ACTN4-206ENST00000489451 PCDHB7Q9Y5E2 793 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 PCDHA10Q9Y5I2 948 aa13.32□□□□□ -0.28
ACTN4-206ENST00000489451 PLXNA3P51805 1871 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 CCDC196A0A1B0GTZ2 297 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 M0R2N6 131 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 FSCN2O14926 492 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 STBD1O95210 358 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 IFNAR1P17181 557 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 PDIA3P30101 505 aaKnown RBP13.31□□□□□ -0.28
ACTN4-206ENST00000489451 TCF15Q12870 199 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 DRP2Q13474 957 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 B3GNT9Q6UX72 402 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 RBM23Q86U06 439 aaKnown RBP13.31□□□□□ -0.28
ACTN4-206ENST00000489451 COLGALT1Q8NBJ5 622 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 CASD1Q96PB1 797 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 CEP89Q96ST8 783 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 SLC26A6Q9BXS9 759 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 C1orf112Q9NSG2 853 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 TYW1Q9NV66 732 aaKnown RBP13.31□□□□□ -0.28
ACTN4-206ENST00000489451 LRFN2Q9ULH4 789 aa13.31□□□□□ -0.28
ACTN4-206ENST00000489451 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 TMEM150BA6NC51 233 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 PER2O15055 1255 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 GPR182O15218 404 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 FGF18O76093 207 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 OATP04181 439 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 PSAPP07602 524 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 ATF7P17544 494 aaPredicted RBP13.3□□□□□ -0.28
ACTN4-206ENST00000489451 NDUFV1P49821 464 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 NLRP11P59045 1033 aaKnown RBP13.3□□□□□ -0.28
ACTN4-206ENST00000489451 CCT2P78371 535 aaKnown RBP13.3□□□□□ -0.28
ACTN4-206ENST00000489451 FGD1P98174 961 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 PRKCEQ02156 737 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 COASYQ13057 564 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms