RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 MTERF2Q49AM1 385 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 FAM26DQ5JW98 314 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
COL4A5-206ENST00000489230 TCP11Q8WWU5 503 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 CTAGE1Q96RT6 745 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 MAP7D2Q96T17 732 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 PPP1R12CQ9BZL4 782 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 SUGCTQ9HAC7 445 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 CCDC39Q9UFE4 941 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 RCOR1Q9UKL0 485 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 ZDHHC9Q9Y397 364 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 SQORQ9Y6N5 450 aa13.88□□□□□ -0.19
COL4A5-206ENST00000489230 ASAP2O43150 1006 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 C22orf31O95567 290 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 DDIT3P35638 169 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 POLGP54098 1239 aaPredicted RBP13.87□□□□□ -0.19
COL4A5-206ENST00000489230 TRIM71Q2Q1W2 868 aaKnown RBP13.87□□□□□ -0.19
COL4A5-206ENST00000489230 ODR4Q5SWX8 454 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 HYIQ5T013 277 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 ZNF618Q5T7W0 954 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 LRRC8DQ7L1W4 858 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 CABP7Q86V35 215 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 KIAA0319LQ8IZA0 1049 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 USP38Q8NB14 1042 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 TRAPPC12Q8WVT3 735 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 DNAJB3Q8WWF6 145 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 SYMPKQ92797 1274 aaKnown RBP13.87□□□□□ -0.19
COL4A5-206ENST00000489230 CCSER1Q9C0I3 900 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 KCNG1Q9UIX4 513 aa13.87□□□□□ -0.19
COL4A5-206ENST00000489230 FBXO2Q9UK22 296 aaPredicted RBP13.87□□□□□ -0.19
COL4A5-206ENST00000489230 MYH9P35579 1960 aaKnown RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 IGKV6-21A0A0C4DH24 114 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 ARHGEF35A5YM69 484 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 CUTAO60888 179 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 CCL23P55773 120 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 NPEPPSP55786 919 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 DNM1Q05193 864 aaKnown RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 FOXD4L6Q3SYB3 417 aaPredicted RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 FOXD4L3Q6VB84 417 aaPredicted RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 RUFY4Q6ZNE9 571 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 RASSF8Q8NHQ8 419 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 PIGOQ8TEQ8 1089 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 DHX38Q92620 1227 aaKnown RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 RNPC3Q96LT9 517 aaKnown RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 FAM49AQ9H0Q0 323 aaPredicted RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 CSRNP2Q9H175 543 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 TTYH1Q9H313 450 aaPredicted RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 DHX33Q9H6R0 707 aaKnown RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 IL23AQ9NPF7 189 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 PRDM6Q9NQX0 595 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 DDX19AQ9NUU7 478 aaKnown RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 CHMP5Q9NZZ3 219 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 WRAP73Q9P2S5 460 aaPredicted RBP13.86□□□□□ -0.19
COL4A5-206ENST00000489230 KAT6AQ92794 2004 aa13.86□□□□□ -0.19
COL4A5-206ENST00000489230 EYSQ5T1H1 3165 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 CDH23Q9H251 3354 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 TMEM265A0A087WTH1 108 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 EYA4O95677 639 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 FGBP02675 491 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 ACTN1P12814 892 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 CSF2RAP15509 400 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 NCLP19338 710 aaKnown RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 ITGB8P26012 769 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 CDC25AP30304 524 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 ME1P48163 572 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 RARRES1P49788 294 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 MRPS6P82932 125 aaKnown RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 MXD4Q14582 209 aaPredicted RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 ZRSR1Q15695 479 aaKnown RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 MCPH1Q8NEM0 835 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 SPATA32Q96LK8 384 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 IPO9Q96P70 1041 aaKnown RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 CEP89Q96ST8 783 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 MMTAG2Q9BU76 263 aaKnown RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 CELF4Q9BZC1 486 aaKnown RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 INO80BQ9C086 356 aaPredicted RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 FTOQ9C0B1 505 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 MTIF3Q9H2K0 278 aaKnown RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 KCND2Q9NZV8 630 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 SUCLA2Q9P2R7 463 aaPredicted RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 AKT3Q9Y243 479 aa13.85□□□□□ -0.19
COL4A5-206ENST00000489230 SPTBN5Q9NRC6 3674 aaKnown RBP13.85□□□□□ -0.19
COL4A5-206ENST00000489230 PP2D1A8MPX8 630 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 ZBTB39O15060 712 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 EFCAB14O75071 495 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 CRYBB1P53674 252 aaPredicted RBP13.84□□□□□ -0.19
COL4A5-206ENST00000489230 PLA2G4FQ68DD2 849 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 PSRC1Q6PGN9 363 aaPredicted RBP13.84□□□□□ -0.19
COL4A5-206ENST00000489230 POTEGQ6S5H5 508 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 PADI6Q6TGC4 694 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 CCDC73Q6ZRK6 1079 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 LINC01465Q8N7H1 131 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 PSPC1Q8WXF1 523 aaKnown RBP13.84□□□□□ -0.19
COL4A5-206ENST00000489230 MTRQ99707 1265 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 PYM1Q9BRP8 204 aaKnown RBP13.84□□□□□ -0.19
COL4A5-206ENST00000489230 TIPINQ9BVW5 301 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 WNT8AQ9H1J5 351 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 ATP6V0A4Q9HBG4 840 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
COL4A5-206ENST00000489230 FAM13BQ9NYF5 915 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms