RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ASB1Q9Y576 335 aa6.58□□□□□ -1.36
SMC4-219ENST00000487747 NARSO43776 548 aaKnown RBP6.57□□□□□ -1.36
SMC4-219ENST00000487747 RPS19P39019 145 aaKnown RBP6.57□□□□□ -1.36
SMC4-219ENST00000487747 IRF9Q00978 393 aa6.57□□□□□ -1.36
SMC4-219ENST00000487747 SAFB2Q14151 953 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMC4-219ENST00000487747 RTN4RL1Q86UN2 441 aaPredicted RBP6.57□□□□□ -1.36
SMC4-219ENST00000487747 WDR48Q8TAF3 677 aa6.57□□□□□ -1.36
SMC4-219ENST00000487747 MENTQ9BUN1 341 aa6.57□□□□□ -1.36
SMC4-219ENST00000487747 CSRNP2Q9H175 543 aa6.57□□□□□ -1.36
SMC4-219ENST00000487747 TLR9Q9NR96 1032 aa6.57□□□□□ -1.36
SMC4-219ENST00000487747 PTCH2Q9Y6C5 1203 aa6.57□□□□□ -1.36
SMC4-219ENST00000487747 DVL2O14641 736 aa6.56□□□□□ -1.36
SMC4-219ENST00000487747 PTH1RQ03431 593 aa6.56□□□□□ -1.36
SMC4-219ENST00000487747 ADAM15Q13444 863 aa6.56□□□□□ -1.36
SMC4-219ENST00000487747 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
SMC4-219ENST00000487747 C2orf69Q8N8R5 385 aa6.56□□□□□ -1.36
SMC4-219ENST00000487747 PMFBP1Q8TBY8 1022 aa6.56□□□□□ -1.36
SMC4-219ENST00000487747 THAP3Q8WTV1 239 aaPredicted RBP6.56□□□□□ -1.36
SMC4-219ENST00000487747 ARMC5Q96C12 935 aa6.56□□□□□ -1.36
SMC4-219ENST00000487747 CLUHP3Q96NS8 147 aa6.56□□□□□ -1.36
SMC4-219ENST00000487747 SLC26A4O43511 780 aa6.55□□□□□ -1.36
SMC4-219ENST00000487747 KRT37O76014 449 aa6.55□□□□□ -1.36
SMC4-219ENST00000487747 HIBADHP31937 336 aaKnown RBP6.55□□□□□ -1.36
SMC4-219ENST00000487747 MECP2P51608 486 aaKnown RBP6.55□□□□□ -1.36
SMC4-219ENST00000487747 ALDH6A1Q02252 535 aaKnown RBP6.55□□□□□ -1.36
SMC4-219ENST00000487747 FHL2Q14192 279 aa6.55□□□□□ -1.36
SMC4-219ENST00000487747 GRM7Q14831 915 aa6.55□□□□□ -1.36
SMC4-219ENST00000487747 LSM12Q3MHD2 195 aaKnown RBP6.55□□□□□ -1.36
SMC4-219ENST00000487747 OTOP1Q7RTM1 612 aa6.55□□□□□ -1.36
SMC4-219ENST00000487747 ZSWIM2Q8NEG5 633 aa6.55□□□□□ -1.36
SMC4-219ENST00000487747 FAM89AQ96GI7 184 aa6.55□□□□□ -1.36
SMC4-219ENST00000487747 MRPL4Q9BYD3 311 aaKnown RBP6.55□□□□□ -1.36
SMC4-219ENST00000487747 NCOA5Q9HCD5 579 aaKnown RBP6.55□□□□□ -1.36
SMC4-219ENST00000487747 OVOL3O00110 214 aa6.54□□□□□ -1.36
SMC4-219ENST00000487747 ZNF202O95125 648 aa6.54□□□□□ -1.36
SMC4-219ENST00000487747 RAPGEF3O95398 923 aa6.54□□□□□ -1.36
SMC4-219ENST00000487747 ACRV1P26436 265 aa6.54□□□□□ -1.36
SMC4-219ENST00000487747 APEX1P27695 318 aaKnown RBP6.54□□□□□ -1.36
SMC4-219ENST00000487747 RGS3P49796 1198 aa6.54□□□□□ -1.36
SMC4-219ENST00000487747 ANTXR2P58335 489 aa6.54□□□□□ -1.36
SMC4-219ENST00000487747 ATP2C1P98194 919 aaPredicted RBP6.54□□□□□ -1.36
SMC4-219ENST00000487747 C2orf27AQ580R0 203 aa6.54□□□□□ -1.36
SMC4-219ENST00000487747 FNDC7Q5VTL7 733 aa6.54□□□□□ -1.36
SMC4-219ENST00000487747 SHCBP1Q8NEM2 672 aa6.54□□□□□ -1.36
SMC4-219ENST00000487747 CACTINQ8WUQ7 758 aaKnown RBP6.54□□□□□ -1.36
SMC4-219ENST00000487747 PLEKHG4BQ96PX9 1271 aa6.54□□□□□ -1.36
SMC4-219ENST00000487747 CTDP1Q9Y5B0 961 aaPredicted RBP6.54□□□□□ -1.36
SMC4-219ENST00000487747 HIP1RO75146 1068 aa6.53□□□□□ -1.36
SMC4-219ENST00000487747 GLRX3O76003 335 aaKnown RBP6.53□□□□□ -1.36
SMC4-219ENST00000487747 CRB2Q5IJ48 1285 aa6.53□□□□□ -1.36
SMC4-219ENST00000487747 MKL1Q969V6 931 aa6.53□□□□□ -1.36
SMC4-219ENST00000487747 NELFAQ9H3P2 528 aa6.53□□□□□ -1.36
SMC4-219ENST00000487747 SLITRK6Q9H5Y7 841 aa6.53□□□□□ -1.36
SMC4-219ENST00000487747 M0R2C6 588 aa6.52□□□□□ -1.37
SMC4-219ENST00000487747 RIN1Q13671 783 aa6.52□□□□□ -1.37
SMC4-219ENST00000487747 CC2D1AQ6P1N0 951 aaPredicted RBP6.52□□□□□ -1.37
SMC4-219ENST00000487747 SGMS1Q86VZ5 419 aa6.52□□□□□ -1.37
SMC4-219ENST00000487747 D2HGDHQ8N465 521 aa6.52□□□□□ -1.37
SMC4-219ENST00000487747 CALML6Q8TD86 181 aa6.52□□□□□ -1.37
SMC4-219ENST00000487747 BOCQ9BWV1 1114 aa6.52□□□□□ -1.37
SMC4-219ENST00000487747 KANSL2Q9H9L4 492 aa6.52□□□□□ -1.37
SMC4-219ENST00000487747 PODXL2Q9NZ53 605 aa6.52□□□□□ -1.37
SMC4-219ENST00000487747 SH3BP1Q9Y3L3 701 aa6.52□□□□□ -1.37
SMC4-219ENST00000487747 CCDC163A0A0D9SF12 145 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 C2orf78A6NCI8 922 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 NPTXRO95502 500 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 PRLP01236 227 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 ADCY7P51828 1080 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 KIF11P52732 1056 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 SLC6A3Q01959 620 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 ZNF460Q14592 562 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 GPHA2Q96T91 129 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 FOXB1Q99853 325 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 SAMD15Q9P1V8 674 aa6.51□□□□□ -1.37
SMC4-219ENST00000487747 CAPN14A8MX76 684 aa6.5□□□□□ -1.37
SMC4-219ENST00000487747 TRAF5O00463 557 aa6.5□□□□□ -1.37
SMC4-219ENST00000487747 MAFO75444 373 aaPredicted RBP6.5□□□□□ -1.37
SMC4-219ENST00000487747 PTX3P26022 381 aaPredicted RBP6.5□□□□□ -1.37
SMC4-219ENST00000487747 ABHD18Q0P651 414 aa6.5□□□□□ -1.37
SMC4-219ENST00000487747 ZCCHC8Q6NZY4 707 aaKnown RBP6.5□□□□□ -1.37
SMC4-219ENST00000487747 DNAJC2Q99543 621 aaKnown RBP6.5□□□□□ -1.37
SMC4-219ENST00000487747 MSL2Q9HCI7 577 aa6.5□□□□□ -1.37
SMC4-219ENST00000487747 CEP72Q9P209 647 aa6.5□□□□□ -1.37
SMC4-219ENST00000487747 PMS2P1A4D2B8 440 aa6.49□□□□□ -1.37
SMC4-219ENST00000487747 PLD2O14939 933 aa6.49□□□□□ -1.37
SMC4-219ENST00000487747 DNAJC8O75937 253 aaPredicted RBP6.49□□□□□ -1.37
SMC4-219ENST00000487747 APPP05067 770 aa6.49□□□□□ -1.37
SMC4-219ENST00000487747 ADAM8P78325 824 aa6.49□□□□□ -1.37
SMC4-219ENST00000487747 SQSTM1Q13501 440 aa6.49□□□□□ -1.37
SMC4-219ENST00000487747 ADGRE4PQ86SQ3 457 aa6.49□□□□□ -1.37
SMC4-219ENST00000487747 RABGGTAQ92696 567 aa6.49□□□□□ -1.37
SMC4-219ENST00000487747 RPL10LQ96L21 214 aaKnown RBP6.49□□□□□ -1.37
SMC4-219ENST00000487747 TRIM8Q9BZR9 551 aa6.49□□□□□ -1.37
SMC4-219ENST00000487747 VWA7Q9Y334 891 aa6.49□□□□□ -1.37
SMC4-219ENST00000487747 TNPO3Q9Y5L0 923 aaKnown RBP6.49□□□□□ -1.37
SMC4-219ENST00000487747 RBM8AQ9Y5S9 174 aaKnown RBP6.49□□□□□ -1.37
SMC4-219ENST00000487747 A0A1W2PRX2 142 aa6.48□□□□□ -1.37
SMC4-219ENST00000487747 PTPDC1A2A3K4 754 aa6.48□□□□□ -1.37
SMC4-219ENST00000487747 MAP3K12Q12852 859 aa6.48□□□□□ -1.37
SMC4-219ENST00000487747 RRP1BQ14684 758 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms