RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 CCDC137Q6PK04 289 aaKnown RBP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 MAEAQ7L5Y9 396 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TPH2Q8IWU9 490 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 NUDCD1Q96RS6 583 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 NYXQ9GZU5 481 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 PABPC3Q9H361 631 aaKnown RBP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMOD4Q9NZQ9 345 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 ANAPC5Q9UJX4 755 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 USTQ9Y2C2 406 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 STK24Q9Y6E0 443 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TSPOAP1O95153 1857 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 FAM205AQ6ZU69 1335 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 OPLAHO14841 1288 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ADAMTS2O95450 1211 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 SLC9A1P19634 815 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 MSH2P43246 934 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 PHLDB2Q86SQ0 1253 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 FAM178BQ8IXR5 827 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ACTRT1Q8TDG2 376 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 TATDN2Q93075 761 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 STOML1Q9UBI4 398 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 DNAJC12Q9UKB3 198 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 EPHB6O15197 1021 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 DCTN3O75935 186 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 BAG2O95816 211 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ELF3P78545 371 aaPredicted RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 MYL7Q01449 175 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ORC2Q13416 577 aaPredicted RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 NAALADL2Q58DX5 795 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ARHGAP27Q6ZUM4 889 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 JAMLQ86YT9 394 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 CCDC24Q8N4L8 307 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 SLC44A5Q8NCS7 719 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 KIAA0895Q8NCT3 520 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 GLG1Q92896 1179 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZBTB10Q96DT7 871 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 LARSQ9P2J5 1176 aaKnown RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 NAGPAQ9UK23 515 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 C15orf41Q9Y2V0 281 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 CHD2O14647 1828 aaKnown RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ARHGEF35A5YM69 484 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 F8VZ95 297 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZNF263O14978 683 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 DNAJC8O75937 253 aaPredicted RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 UBOX5O94941 541 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 COPB2P35606 906 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 COPS2P61201 443 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 PPM1KQ8N3J5 372 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 PDCD7Q8N8D1 485 aaKnown RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 BBOF1Q8ND07 529 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 CFAP61Q8NHU2 1237 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 TPCN2Q8NHX9 752 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 MTRQ99707 1265 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 SUCLA2Q9P2R7 463 aaPredicted RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 RASA4BC9J798 803 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 hCG_1984214I3L0E3 225 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 RASA4O43374 803 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 IFNB1P01574 187 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 CA4P22748 312 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 MAN1A1P33908 653 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 TRADDQ15628 312 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 MEX3CQ5U5Q3 659 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZC3H18Q86VM9 953 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZNF713Q8N859 430 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZNF653Q96CK0 615 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 MXD3Q9BW11 206 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 SIK3Q9Y2K2 1263 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 RABGAP1Q9Y3P9 1069 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 KDM6AO15550 1401 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 EXOC1LA0A1B0GW35 172 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 POTEB3A0JP26 581 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMEM120BA0PK00 339 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 POTECB2RU33 542 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 TXNDC9O14530 226 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 IRF6O14896 467 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 KLRC4O43908 158 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 NR3C1P04150 777 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ITGA4P13612 1032 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 LONRF1Q17RB8 773 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 LRRC23Q53EV4 343 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 MIIPQ5JXC2 388 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 POTEBQ6S5H4 581 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMC3Q7Z5M5 1100 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 RPUSD2Q8IZ73 545 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 SLC35G2Q8TBE7 412 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 BICD1Q96G01 975 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 VCX3BQ9H321 246 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 VCX3AQ9NNX9 186 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 USP40Q9NVE5 1235 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 OPHN1O60890 802 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 RNASELQ05823 741 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 MKRN3Q13064 507 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 DRAP1Q14919 205 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 KNOP1Q1ED39 458 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ASPRV1Q53RT3 343 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 EPM2AIP1Q7L775 607 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 SFR1Q86XK3 245 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 PURBQ96QR8 312 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ASAP2O43150 1006 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms