RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 CCDC137Q6PK04 289 aaKnown RBP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 MAEAQ7L5Y9 396 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TPH2Q8IWU9 490 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 NUDCD1Q96RS6 583 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 NYXQ9GZU5 481 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 PABPC3Q9H361 631 aaKnown RBP8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMOD4Q9NZQ9 345 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 ANAPC5Q9UJX4 755 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 USTQ9Y2C2 406 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 STK24Q9Y6E0 443 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 TSPOAP1O95153 1857 aa8.27□□□□□ -1.09
COL6A4P1-202ENST00000487147 FAM205AQ6ZU69 1335 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 OPLAHO14841 1288 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ADAMTS2O95450 1211 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 SLC9A1P19634 815 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 MSH2P43246 934 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 PHLDB2Q86SQ0 1253 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 FAM178BQ8IXR5 827 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ACTRT1Q8TDG2 376 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 TATDN2Q93075 761 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 STOML1Q9UBI4 398 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 DNAJC12Q9UKB3 198 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 EPHB6O15197 1021 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 DCTN3O75935 186 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 BAG2O95816 211 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ELF3P78545 371 aaPredicted RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 MYL7Q01449 175 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ORC2Q13416 577 aaPredicted RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 NAALADL2Q58DX5 795 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ARHGAP27Q6ZUM4 889 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 JAMLQ86YT9 394 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 CCDC24Q8N4L8 307 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 SLC44A5Q8NCS7 719 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 KIAA0895Q8NCT3 520 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 GLG1Q92896 1179 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZBTB10Q96DT7 871 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 LARSQ9P2J5 1176 aaKnown RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 NAGPAQ9UK23 515 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 C15orf41Q9Y2V0 281 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 CHD2O14647 1828 aaKnown RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ARHGEF35A5YM69 484 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 F8VZ95 297 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZNF263O14978 683 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 DNAJC8O75937 253 aaPredicted RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 UBOX5O94941 541 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 COPB2P35606 906 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 COPS2P61201 443 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 PPM1KQ8N3J5 372 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 PDCD7Q8N8D1 485 aaKnown RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 BBOF1Q8ND07 529 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 CFAP61Q8NHU2 1237 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 TPCN2Q8NHX9 752 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 MTRQ99707 1265 aa8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 SUCLA2Q9P2R7 463 aaPredicted RBP8.26□□□□□ -1.09
COL6A4P1-202ENST00000487147 RASA4BC9J798 803 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 hCG_1984214I3L0E3 225 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 RASA4O43374 803 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 IFNB1P01574 187 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 CA4P22748 312 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 MAN1A1P33908 653 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 TRADDQ15628 312 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 MEX3CQ5U5Q3 659 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZC3H18Q86VM9 953 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZNF713Q8N859 430 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ZNF653Q96CK0 615 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 MXD3Q9BW11 206 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 SIK3Q9Y2K2 1263 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 RABGAP1Q9Y3P9 1069 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 KDM6AO15550 1401 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 EXOC1LA0A1B0GW35 172 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 POTEB3A0JP26 581 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMEM120BA0PK00 339 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 POTECB2RU33 542 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 TXNDC9O14530 226 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 IRF6O14896 467 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 KLRC4O43908 158 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 NR3C1P04150 777 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ITGA4P13612 1032 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 LONRF1Q17RB8 773 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 LRRC23Q53EV4 343 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 MIIPQ5JXC2 388 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 POTEBQ6S5H4 581 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 TMC3Q7Z5M5 1100 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 RPUSD2Q8IZ73 545 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 SLC35G2Q8TBE7 412 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 BICD1Q96G01 975 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 VCX3BQ9H321 246 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 VCX3AQ9NNX9 186 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 USP40Q9NVE5 1235 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 OPHN1O60890 802 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 RNASELQ05823 741 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 MKRN3Q13064 507 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 DRAP1Q14919 205 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 KNOP1Q1ED39 458 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ASPRV1Q53RT3 343 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 EPM2AIP1Q7L775 607 aaPredicted RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 SFR1Q86XK3 245 aa8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 PURBQ96QR8 312 aaKnown RBP8.25□□□□□ -1.09
COL6A4P1-202ENST00000487147 ASAP2O43150 1006 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms