RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 FAM167BQ9BTA0 163 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 RIC8AQ9NPQ8 531 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 CTNNAL1Q9UBT7 734 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 CACNA1SQ13698 1873 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 LONRF1Q17RB8 773 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 MFSD14BQ5SR56 506 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 HP1BP3Q5SSJ5 553 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-211ENST00000486901 DCAF12L1Q5VU92 463 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 PPP4R3AQ6IN85 833 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 THAP2Q9H0W7 228 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 MAGEF1Q9HAY2 307 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 EVI5O60447 810 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 EZRP15311 586 aaKnown RBP13.45□□□□□ -0.26
HSPG2-211ENST00000486901 DR1Q01658 176 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 FAM182AQ5T1J6 154 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 SPICE1Q8N0Z3 855 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 SLC17A8Q8NDX2 589 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 ALG3Q92685 438 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 RNF25Q96BH1 459 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-211ENST00000486901 CHMP6Q96FZ7 201 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 JMJD4Q9H9V9 463 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 AGAP1Q9UPQ3 857 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 RGS16O15492 202 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-211ENST00000486901 AFPP02771 609 aaKnown RBP13.44□□□□□ -0.26
HSPG2-211ENST00000486901 DRD4P21917 467 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 CTTNQ14247 550 aaKnown RBP13.44□□□□□ -0.26
HSPG2-211ENST00000486901 MESDQ14696 234 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 C2CD6Q53TS8 623 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 CAPN12Q6ZSI9 719 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 LRRC57Q8N9N7 239 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 SPZ1Q9BXG8 430 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 NOD2Q9HC29 1040 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 INTS9Q9NV88 658 aaKnown RBP13.44□□□□□ -0.26
HSPG2-211ENST00000486901 AMFRQ9UKV5 643 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 CEP83Q9Y592 693 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 TISP43B9A030 160 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 ANKRD63C9JTQ0 380 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 FLOT1O75955 427 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 UFL1O94874 794 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 TRIM37O94972 964 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 CLSTN1O94985 981 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 TNFRSF8P28908 595 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 GALNT17Q6IS24 598 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 CCDC63Q8NA47 563 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 CCDC26Q8TAB7 109 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 LNX1Q8TBB1 728 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-211ENST00000486901 TATDN2Q93075 761 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 PCIF1Q9H4Z3 704 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 PNMA3Q9UL41 463 aa13.44□□□□□ -0.26
HSPG2-211ENST00000486901 RNASELQ05823 741 aaKnown RBP13.43□□□□□ -0.26
HSPG2-211ENST00000486901 DAB2IPQ5VWQ8 1189 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 NT5DC3Q86UY8 548 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 CCDC197Q8NCU1 140 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 RPGRQ92834 1020 aaKnown RBP13.43□□□□□ -0.26
HSPG2-211ENST00000486901 RUSC1Q9BVN2 902 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 KCTD10Q9H3F6 313 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 FGFR1OP2Q9NVK5 253 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 RNF14Q9UBS8 474 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 DAAM1Q9Y4D1 1078 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 ADAMTSL3P82987 1691 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 RBAK-RBAKDNI3L0D1 243 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 ERFP50548 548 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 SF3B3Q15393 1217 aaKnown RBP13.43□□□□□ -0.26
HSPG2-211ENST00000486901 DENND2CQ68D51 928 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 RPAINQ86UA6 219 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 CATSPER3Q86XQ3 398 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 MREGQ8N565 214 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 SLC20A1Q8WUM9 679 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 NSMCE1Q8WV22 266 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 PLCD4Q9BRC7 762 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 DDX23Q9BUQ8 820 aaKnown RBP13.43□□□□□ -0.26
HSPG2-211ENST00000486901 MCM8Q9UJA3 840 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 HOXD13P35453 343 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.262e-7■■■□□ 15.3
HSPG2-211ENST00000486901 MTM1Q13496 603 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 CUL1Q13616 776 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 KCNQ5Q9NR82 932 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 USP40Q9NVE5 1235 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 CTTNBP2NLQ9P2B4 639 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 UBR2Q8IWV8 1755 aa13.43□□□□□ -0.26
HSPG2-211ENST00000486901 GTF2IP78347 998 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 ELF3P78545 371 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-211ENST00000486901 DRAP1Q14919 205 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-211ENST00000486901 PREPLQ4J6C6 727 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-211ENST00000486901 PRUNE1Q86TP1 453 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 CD302Q8IX05 232 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 AIPL1Q9NZN9 384 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 TMEM59LQ9UK28 342 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 BCORQ6W2J9 1755 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 UBOX5O94941 541 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 PPP1R2P41236 205 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 PMS2P54278 862 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 FAM47EQ6ZV65 393 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 NEDD1Q8NHV4 660 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 CCT6BQ92526 530 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 PCDHA1Q9Y5I3 950 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 DDX39AO00148 427 aaKnown RBP13.42□□□□□ -0.26
HSPG2-211ENST00000486901 GH1P01241 217 aa13.42□□□□□ -0.26
HSPG2-211ENST00000486901 NR3C1P04150 777 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 858.6 ms