RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 GLG1Q92896 1179 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 ERVK-5Q9HDB9 667 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 MLXIPLQ9NP71 852 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 C2CD2Q9Y426 696 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 RPTORQ8N122 1335 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 UBR2Q8IWV8 1755 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 TRAF5O00463 557 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 LAD1O00515 517 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 CCNT1O60563 726 aaKnown RBP12.8□□□□□ -0.36
VTI1A-205ENST00000483122 HIP1RO75146 1068 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 ACTN1P12814 892 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 PCK1P35558 622 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 MGAT5Q09328 741 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 GRB10Q13322 594 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 LETM2Q2VYF4 491 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 C6orf118Q5T5N4 469 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 FAM196AQ6ZSG2 479 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 IRF2BP2Q7Z5L9 587 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 NT5DC3Q86UY8 548 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 GALNT15Q8N3T1 639 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 ANKLE1Q8NAG6 615 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 FBXO25Q8TCJ0 367 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 DYDC1Q8WWB3 177 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 TSG101Q99816 390 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 ERP44Q9BS26 406 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 SUCLA2Q9P2R7 463 aaPredicted RBP12.8□□□□□ -0.36
VTI1A-205ENST00000483122 NAGPAQ9UK23 515 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 GPR75-ASB3A0A0A6YYF3 556 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 WFS1O76024 890 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 GJB6O95452 261 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 NPTXRO95502 500 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 PYGLP06737 847 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 CREB1P16220 341 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 RAD23BP54727 409 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 DR1Q01658 176 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 AUHQ13825 339 aaKnown RBP12.79□□□□□ -0.36
VTI1A-205ENST00000483122 NUGGCQ68CJ6 796 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 ALKBH5Q6P6C2 394 aaKnown RBP12.79□□□□□ -0.36
VTI1A-205ENST00000483122 KIF6Q6ZMV9 814 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 SLFN11Q7Z7L1 901 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 GBP7Q8N8V2 638 aaPredicted RBP12.79□□□□□ -0.36
VTI1A-205ENST00000483122 RXFP1Q9HBX9 757 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 ABCF2Q9UG63 623 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 DAAM1Q9Y4D1 1078 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 ASB3Q9Y575 518 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 PEX11AO75192 247 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 FGRP09769 529 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 FGFR4P22455 802 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 PRPF4BQ13523 1007 aaKnown RBP12.79□□□□□ -0.36
VTI1A-205ENST00000483122 LAMB3Q13751 1172 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 DIXDC1Q155Q3 683 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 SLC35G1Q2M3R5 365 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 MTHFD1LQ6UB35 978 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 SPATA21Q7Z572 469 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 EXOC3L1Q86VI1 746 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 CALML4Q96GE6 196 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 PNMA5Q96PV4 448 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 RPS6KC1Q96S38 1066 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 RIOK1Q9BRS2 568 aaKnown RBP12.79□□□□□ -0.36
VTI1A-205ENST00000483122 SH3GLB2Q9NR46 395 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 ANKIB1Q9P2G1 1089 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 ARL2BPQ9Y2Y0 163 aa12.79□□□□□ -0.36
VTI1A-205ENST00000483122 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 PAPPAQ13219 1627 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 PVALEFA0A1B0GWK0 134 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 USP17L12C9JPN9 530 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 USP17L21D6R901 530 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 FLOT1O75955 427 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 PTENP60484 403 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 ZCWPW2Q504Y3 356 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 TNFAIP8L3Q5GJ75 292 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 DCAF12L1Q5VU92 463 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 OTUD6AQ7L8S5 288 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 HEATR3Q7Z4Q2 680 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 LMNTD2Q8IXW0 634 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 HES6Q96HZ4 224 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 ANKRD27Q96NW4 1050 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 PLCD4Q9BRC7 762 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 RNPEPL1Q9HAU8 725 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 ETNK1Q9HBU6 452 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 PRKAG3Q9UGI9 489 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
VTI1A-205ENST00000483122 RTCBQ9Y3I0 505 aaKnown RBP12.78□□□□□ -0.36
VTI1A-205ENST00000483122 FOXO6A8MYZ6 492 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 RNF8O76064 485 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 CCNB1P14635 433 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 GM2AP17900 193 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 ATP6V1C1P21283 382 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 GBP1P32455 592 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 MRPS35P82673 323 aaKnown RBP12.78□□□□□ -0.36
VTI1A-205ENST00000483122 FKBP3Q00688 224 aaKnown RBP12.78□□□□□ -0.36
VTI1A-205ENST00000483122 C10orf76Q5T2E6 689 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 FAM182BQ5T319 152 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 SOGA3Q5TF21 947 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 CGB2Q6NT52 195 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 TMEM154Q6P9G4 183 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 FBF1Q8TES7 1133 aa12.78□□□□□ -0.36
VTI1A-205ENST00000483122 LARP4BQ92615 738 aaKnown RBP12.78□□□□□ -0.36
VTI1A-205ENST00000483122 EZH1Q92800 747 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms